RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 C5orf49A4QMS7 147 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 C5orf63A6NC05 138 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 H7C417 338 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 ORC5O43913 435 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 GMDSO60547 372 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 NRASP01111 189 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 TPOP07202 933 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 TMIGD3P0DMS9 266 aaPredicted RBP8.99□□□□□ -0.97
LIG3-203ENST00000585370 NAT2P11245 290 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 CBR1P16152 277 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 FAHP16930 419 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 COX5AP20674 150 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 IGHV1-2P23083 117 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 HOXC12P31275 282 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 FAUP35544 74 aaKnown RBP8.99□□□□□ -0.97
LIG3-203ENST00000585370 GDNFP39905 211 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 PTGFRP43088 359 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 FUT6P51993 359 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 ATP1B3P54709 279 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 BTG1P62324 171 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 QRFPP83859 136 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 HGFACQ04756 655 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 MADCAM1Q13477 382 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 UBE2V2Q15819 145 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 GABRA6Q16445 453 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 TBC1D28Q2M2D7 210 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 GLIPR1L1Q6UWM5 242 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 LHFPL2Q6ZUX7 228 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 ZNF101Q8IZC7 436 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 FAM169BQ8N8A8 192 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 DTX3Q8N9I9 347 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 STEAP2Q8NFT2 490 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 OR52I2Q8NH67 350 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 CREB3L1Q96BA8 519 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 CCDC120Q96HB5 630 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 ACTR6Q9GZN1 396 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 TP63Q9H3D4 680 aaPredicted RBP8.99□□□□□ -0.97
LIG3-203ENST00000585370 MTFP1Q9UDX5 166 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 KCNN3Q9UGI6 736 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 ANKRD17O75179 2603 aaKnown RBP8.99□□□□□ -0.97
LIG3-203ENST00000585370 TRGV8A0A0C4DH27 118 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ANKRD20A5PA0PJZ0 165 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 CCL21O00585 134 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 PRRG2O14669 202 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 LANCL1O43813 399 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ICMTO60725 284 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ZNF780AO75290 641 aaPredicted RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 CST4P01036 141 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 CGAP01215 116 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 MELTFP08582 738 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 CSF1P09603 554 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 CD3GP09693 182 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 VSIG8P0DPA2 414 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 SPNP16150 400 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 SLC6A1P30531 599 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 CEACAM8P31997 349 aaPredicted RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 KIR2DL3P43628 341 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 RBP2P50120 134 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 EFNB2P52799 333 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 RAG2P55895 527 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ACTBP60709 375 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ACTG1P63261 375 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ZNF92Q03936 586 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 PMPCAQ10713 525 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 KLF9Q13886 244 aaPredicted RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 HIKESHIQ53FT3 197 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 MRPL21Q7Z2W9 205 aaKnown RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 MRGPRGQ86SM5 289 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ZNF554Q86TJ5 538 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 MDP1Q86V88 176 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 IZUMO1Q8IYV9 350 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 GCNT2Q8N0V5 402 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 GABRG1Q8N1C3 465 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 PAQR4Q8N4S7 273 aaPredicted RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 SLC30A7Q8NEW0 376 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 OR56B1Q8NGI3 324 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 OR2AE1Q8NHA4 323 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 STARD4Q96DR4 205 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 ZNF75AQ96N20 296 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 MARVELD1Q9BSK0 173 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 SFXN3Q9BWM7 321 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 DPAGT1Q9H3H5 408 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 AUNIPQ9H7T9 357 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 KLF2Q9Y5W3 355 aaPredicted RBP8.98□□□□□ -0.97
LIG3-203ENST00000585370 NUBP2Q9Y5Y2 271 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 F8P00451 2351 aa8.98□□□□□ -0.97
LIG3-203ENST00000585370 TNFSF13O75888 250 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 LPLP06858 475 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
LIG3-203ENST00000585370 FAM157BP0CG42 384 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 TRAPPC2P0DI81 140 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 TRAPPC2BP0DI82 140 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 CCNOP22674 350 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 ACKR3P25106 362 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 CA7P43166 264 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 MTCP1P56278 107 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 RBPJQ06330 500 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 GTF3C1Q12789 2109 aa8.97□□□□□ -0.97
LIG3-203ENST00000585370 TNK1Q13470 666 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms