RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CRISP1P54107 249 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 CSNK2BP67870 215 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 PRDX4Q13162 271 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 APOFQ13790 326 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 DEFB112Q30KQ8 113 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 TMEM236Q5W0B7 351 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 KCTD8Q6ZWB6 473 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 ZDHHC23Q8IYP9 409 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 BBS1Q8NFJ9 593 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 OR8B12Q8NGG6 310 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 FAM81AQ8TBF8 368 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 OR5P3Q8WZ94 311 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 SLC7A6OSQ96CW6 309 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-206ENST00000584112 FAM71F1Q96KD3 344 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-206ENST00000584112 HIST1H2AAQ96QV6 131 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 TBX15Q96SF7 602 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 MROQ9BYG7 248 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 SIRPDQ9H106 197 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 CNTD2Q9H8S5 307 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 PAPOLBQ9NRJ5 636 aaKnown RBP9.18□□□□□ -0.94
CCDC47-206ENST00000584112 NECAP2Q9NVZ3 263 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 TVP23BQ9NYZ1 205 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 DNAJB11Q9UBS4 358 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 RPUSD1Q9UJJ7 312 aaKnown RBP9.18□□□□□ -0.94
CCDC47-206ENST00000584112 KPTNQ9Y664 436 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 TMEM14AQ9Y6G1 99 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 ABCA13Q86UQ4 5058 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
CCDC47-206ENST00000584112 HECTD4Q9Y4D8 3996 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 A0A0U1RQV5 110 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 CENPVL3A0A0U1RRI6 287 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF816-ZNF321PA0A0X1KG74 233 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 MDFIC2A0A1B0GVS7 189 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 NKX6-3A6NJ46 265 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF850A8MQ14 1090 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 CDIPTO14735 213 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 NDUFB3O43676 98 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF254O75437 659 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ATP6V1B1P15313 513 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ACKR3P25106 362 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 DCTDP32321 178 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 POU4F2Q12837 409 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 OXLD1Q5BKU9 147 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 LRRC10Q5BKY1 277 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 WDR38Q5JTN6 314 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ATPAF1Q5TC12 328 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-206ENST00000584112 FAHD1Q6P587 224 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 Q6YL49 198 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 CMTM4Q8IZR5 234 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 TMEM86BQ8N661 226 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ASB17Q8WXJ9 295 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 PIGCQ92535 297 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 SGCDQ92629 289 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 RNF170Q96K19 258 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 TEAD3Q99594 435 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 CCL13Q99616 98 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 ACOXLQ9NUZ1 547 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 HAO2Q9NYQ3 351 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 KLHDC2Q9Y2U9 406 aa9.17□□□□□ -0.94
CCDC47-206ENST00000584112 SOX21Q9Y651 276 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-206ENST00000584112 IGHV1-69DA0A0B4J2H0 117 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 A0A1B0GUS0 222 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 A0A1B0GVI7 797 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 TMEM269A0A1B0GVZ9 245 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 K7EIL1 84 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 IGHV1-69P01742 117 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 CRYBA1P05813 215 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 RASSF2P50749 326 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 RIDAP52758 137 aaKnown RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ACTR3P61158 418 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ARF6P62330 175 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ESRRGP62508 458 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF829Q3KNS6 432 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 CDONQ4KMG0 1287 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 FAM76BQ5HYJ3 339 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 STUMQ69YW2 141 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 COMMD2Q86X83 199 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ZNF679Q8IYX0 411 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 SCCPDHQ8NBX0 429 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 OR5K1Q8NHB7 308 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 TBC1D15Q8TC07 691 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 SSMEM1Q8WWF3 244 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 RPL3LQ92901 407 aaKnown RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 LHX4Q969G2 390 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 MED30Q96HR3 178 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 LYZL4Q96KX0 146 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 CNN2Q99439 309 aaKnown RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 MNTQ99583 582 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 PPP1R3EQ9H7J1 279 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 KRT84Q9NSB2 600 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 H2AFY2Q9P0M6 372 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 NKX1-2Q9UD57 310 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-206ENST00000584112 ENOPH1Q9UHY7 261 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 POMT1Q9Y6A1 747 aa9.16□□□□□ -0.94
CCDC47-206ENST00000584112 CCDC182A6NF36 153 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 OR5B21A6NL26 309 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 GSC2O15499 205 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 MTRF1O75570 445 aaKnown RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 FCN3O75636 299 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms