RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 C1orf87Q8N0U7 546 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 PARP16Q8N5Y8 322 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 OR5D14Q8NGL3 314 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 RGP1Q92546 391 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-213ENST00000582230 RAB1CQ92928 201 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 REG4Q9BYZ8 158 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 BPESC1Q9GZL8 116 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 TLNRD1Q9H1K6 362 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 ACOT13Q9NPJ3 140 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 UFSP2Q9NUQ7 469 aa16.92■□□□□ 0.3
TOP3A-213ENST00000582230 CCDC168Q8NDH2 2452 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 PNMA8CA0A1B0GUJ8 204 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 TRIM64BA6NI03 449 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 A6NLC8 198 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 ZNF732B4DXR9 585 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 TMEM178BH3BS89 294 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 TNFAIP8O95379 198 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 OCM2P0CE71 109 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 HSMCR30P0CW71 290 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 THBS2P35442 1172 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 PMELP40967 661 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 ZNF154Q13106 437 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 CNN3Q15417 329 aaKnown RBP16.91■□□□□ 0.3
TOP3A-213ENST00000582230 UBE2V2Q15819 145 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 ZNF773Q6PK81 442 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 WDR86Q86TI4 376 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 SPARTQ8N0X7 666 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 ZNF420Q8TAQ5 688 aaPredicted RBP16.91■□□□□ 0.3
TOP3A-213ENST00000582230 UFD1Q92890 307 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 MGLLQ99685 303 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 FGF23Q9GZV9 251 aaPredicted RBP16.91■□□□□ 0.3
TOP3A-213ENST00000582230 C1orf123Q9NWV4 160 aa16.91■□□□□ 0.3
TOP3A-213ENST00000582230 PRRC2AP48634 2157 aaKnown RBP16.91■□□□□ 0.3
TOP3A-213ENST00000582230 CSMD1Q96PZ7 3565 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 PQLC2LA1A4F0 135 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 LRP5LA4QPB2 252 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 TPBGQ13641 420 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 MS4A15Q8N5U1 240 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 FCGR1BQ92637 280 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 THRSPQ92748 146 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 OR51I2Q9H344 312 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 ZCCHC4Q9H5U6 513 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 NEK6Q9HC98 313 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 RNF7Q9UBF6 113 aa16.9■□□□□ 0.3
TOP3A-213ENST00000582230 TRBV5-5A0A0J9YX44 114 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 RNF223E7ERA6 249 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 ALX3O95076 343 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 FSTL3O95633 263 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 OCMP0CE72 109 aaPredicted RBP16.89■□□□□ 0.29
TOP3A-213ENST00000582230 ATF1P18846 271 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 USF1P22415 310 aaPredicted RBP16.89■□□□□ 0.29
TOP3A-213ENST00000582230 PRKACBP22694 351 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 CFHR2P36980 270 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 SOX2P48431 317 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 FUT6P51993 359 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 RPS11P62280 158 aaKnown RBP eCLIP16.89■□□□□ 0.29
TOP3A-213ENST00000582230 Q499Y3 187 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 DMRTC1Q5HYR2 192 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 ZNF573Q86YE8 665 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 C11orf53Q8IXP5 236 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 DNAAF1Q8NEP3 725 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 TMEM106AQ96A25 262 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 SPSB1Q96BD6 273 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 WIPI2Q9Y4P8 454 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 NPTNQ9Y639 398 aa16.89■□□□□ 0.29
TOP3A-213ENST00000582230 hCG_1807616A0A1W2PRN6 198 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 CYB5R3P00387 301 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-213ENST00000582230 CPEP16870 476 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 PCMT1P22061 227 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 LOXL1Q08397 574 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-213ENST00000582230 UBE2UQ5VVX9 321 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 LIPKQ5VXJ0 399 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 SCCPDHQ8NBX0 429 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 RPL3LQ92901 407 aaKnown RBP16.88■□□□□ 0.29
TOP3A-213ENST00000582230 OPALINQ96PE5 141 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 DCAF16Q9NXF7 216 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 TEX15Q9BXT5 2789 aa16.88■□□□□ 0.29
TOP3A-213ENST00000582230 IGKV1-9A0A0C4DH69 117 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 H7C1Q1 480 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 CDIPTO14735 213 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 BTG1P62324 171 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 TRAM1Q15629 374 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 WDR82Q6UXN9 313 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 ZNF826PQ6ZT77 177 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 OR13C5Q8NGS8 318 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 OR13C9Q8NGT0 318 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 OR10Z1Q8NGY1 313 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 ZNF671Q8TAW3 534 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 BORCS8Q96FH0 119 aa16.87■□□□□ 0.29
TOP3A-213ENST00000582230 PPIAL4EA0A075B759 164 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 A0A096LNT2 108 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 FAM230AA0A1W2PPH8 454 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 ZNF879B4DU55 563 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 PPIAL4DF5H284 164 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 SULT1B1O43704 296 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 LHBP01229 141 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 IGHV2-70P01814 119 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 PPIAL4FP0DN26 164 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 RAB3AP20336 220 aa16.86■□□□□ 0.29
TOP3A-213ENST00000582230 AZGP1P25311 298 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms