RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CDIPTO14735 213 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 NOS1APO75052 506 aaPredicted RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 RPP14O95059 124 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 NRASP01111 189 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 AVPP01185 164 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 RPSAP08865 295 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 ZNF12P17014 697 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 DCKP27707 260 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 CAPGP40121 348 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 NANOS3P60323 173 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 SEC61A1P61619 476 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 MRPL28Q13084 256 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 SMN1Q16637 294 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 TUSC1Q2TAM9 212 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 TP53I3Q53FA7 332 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 CLVS2Q5SYC1 327 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 LAIR2Q6ISS4 152 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 LYPD2Q6UXB3 125 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 SCCPDHQ8NBX0 429 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 SETD9Q8NE22 299 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 HAVCR2Q8TDQ0 301 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 C12orf43Q96C57 262 aaKnown RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 NEIL1Q96FI4 390 aaPredicted RBP10.54□□□□□ -0.72
SNORD55-201ENST00000581525 RNF170Q96K19 258 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 HIST1H2AAQ96QV6 131 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 ADI1Q9BV57 179 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 GNG8Q9UK08 70 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 PCDHB10Q9UN67 800 aa10.54□□□□□ -0.72
SNORD55-201ENST00000581525 OR4C45A6NMZ5 311 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 ZNF205O95201 554 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 CLIC3O95833 236 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 FSHBP01225 129 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 UBCP0CG48 685 aaKnown RBP10.53□□□□□ -0.72
SNORD55-201ENST00000581525 LIMS3P0CW19 117 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 LIMS4P0CW20 117 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 FAHP16930 419 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 HNF1AP20823 631 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 TGM4P49221 684 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 NPY4RP50391 375 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 CSNK2BP67870 215 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 PAX8Q06710 450 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 ALKBH1Q13686 389 aaKnown RBP10.53□□□□□ -0.72
SNORD55-201ENST00000581525 ESCO2Q56NI9 601 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 FAM220AQ7Z4H9 259 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 THAP5Q7Z6K1 395 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 FAM90A1Q86YD7 464 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 TEX29Q8N6K0 151 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 AQP3Q92482 292 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 DMRTB1Q96MA1 342 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 DNTTIP1Q9H147 329 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 OPN4Q9UHM6 478 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 INSIG2Q9Y5U4 225 aa10.53□□□□□ -0.72
SNORD55-201ENST00000581525 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 A0A0X1KG70 313 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 PQLC2LA1A4F0 135 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 IRGMA1A4Y4 181 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 ZNF732B4DXR9 585 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 J3QLW9 94 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 SYT7O43581 403 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 FCN3O75636 299 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 GNAO1P09471 354 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 PIPP12273 146 aaPredicted RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 ZNF19P17023 458 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 EGR1P18146 543 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 AMY2BP19961 511 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 MPZP25189 248 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 GPM6AP51674 278 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 LCN2P80188 198 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 HOXA4Q00056 320 aaPredicted RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 RIPK1Q13546 671 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 WDR25Q64LD2 544 aaPredicted RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 MOB3CQ70IA8 216 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 UTS2BQ765I0 119 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 ZNF485Q8NCK3 441 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 DEFB108BQ8NET1 73 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 CNIH3Q8TBE1 160 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 LRRC29Q8WV35 223 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 CYGBQ8WWM9 190 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 RPL3LQ92901 407 aaKnown RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 C4orf36Q96KX1 117 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 ALG8Q9BVK2 526 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 METTL17Q9H7H0 456 aaPredicted RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 ISG20L2Q9H9L3 353 aaKnown RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 LPAR2Q9HBW0 351 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 MMP26Q9NRE1 261 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 ERVK-18Q9QC07 812 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 CTSZQ9UBR2 303 aa10.52□□□□□ -0.73
SNORD55-201ENST00000581525 DIMT1Q9UNQ2 313 aaKnown RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 CAB39Q9Y376 341 aaPredicted RBP10.52□□□□□ -0.73
SNORD55-201ENST00000581525 KIR2DS1A0A191URI9 304 aa10.51□□□□□ -0.73
SNORD55-201ENST00000581525 A0A1B0GVI7 797 aa10.51□□□□□ -0.73
SNORD55-201ENST00000581525 A6NLC8 198 aa10.51□□□□□ -0.73
SNORD55-201ENST00000581525 ALX3O95076 343 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms