RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CCL15Q16663 113 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 PRR9Q5T870 116 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 SLC35G3Q8N808 338 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 OR10Z1Q8NGY1 313 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 OR1S1Q8NH92 325 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 ING5Q8WYH8 240 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 WDR34Q96EX3 536 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 Q96MT0 163 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 IP6K3Q96PC2 410 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 CSNK1G1Q9HCP0 422 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 CECR2Q9BXF3 1484 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 TICRRQ7Z2Z1 1910 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 SCN4AP35499 1836 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 ISPDA4D126 451 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 CEACAM18A8MTB9 384 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 SMC2O95347 1197 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 ETHE1O95571 254 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 SLC35G6P0C7Q6 338 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 CD28P10747 220 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 IVDP26440 423 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 MTPNP58546 118 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 PPP1CAP62136 330 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 SLC7A5P1Q8MH63 180 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 ARHGAP18Q8N392 663 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 APCDD1LQ8NCL9 501 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 OR2Z1Q8NG97 314 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 OR6K6Q8NGW6 343 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 TMEM234Q8WY98 164 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 SNF8Q96H20 258 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 ZFP3Q96NJ6 502 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 OR51B5Q9H339 312 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 TDRD3Q9H7E2 651 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 KIR3DX1Q9H7L2 352 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 VAX2Q9UIW0 290 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 FLVCR2Q9UPI3 526 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 PPIL1Q9Y3C6 166 aa2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 BAZ2AQ9UIF9 1905 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-205ENST00000581383 UNC13AQ9UPW8 1703 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 CC2D2AQ9P2K1 1620 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 ZNF98A6NK75 572 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 CENPBD1B2RD01 187 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 TRAPPC6AO75865 159 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 NTF3P20783 257 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 IL3RAP26951 378 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 HCCSP53701 268 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 SLC35B1P78383 322 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 ELF3P78545 371 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 DEGS2Q6QHC5 323 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 STK40Q8N2I9 435 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 CYB561A3Q8NBI2 242 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 OR4A15Q8NGL6 344 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 RHOXF2Q9BQY4 288 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 RTBDNQ9BSG5 229 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 CHID1Q9BWS9 393 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 CHRNA10Q9GZZ6 450 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 DHX35Q9H5Z1 703 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 PLEKHF2Q9H8W4 249 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 LZTFL1Q9NQ48 299 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 KLF12Q9Y4X4 402 aa2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-205ENST00000581383 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 EIF4G1Q04637 1599 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 LOC102724200A0A096LPH7 203 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 TRAV8-6A0A0B4J262 113 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 PLEKHA8P1O95397 391 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 OTCP00480 354 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 LHBP01229 141 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 CRYGCP07315 174 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 STAG3L2P0CL84 134 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 HOXB8P17481 243 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 PSMC5P62195 406 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 C2orf54Q08AI8 447 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 ST3GAL4Q11206 333 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 ATP6V1FQ16864 119 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 NKAIN1Q4KMZ8 207 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 HSP90AA4PQ58FG1 418 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 CPTPQ5TA50 214 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 THOC7Q6I9Y2 204 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 MED27Q6P2C8 311 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 PRSS54Q6PEW0 395 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 ASCL4Q6XD76 172 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 ORMDL3Q8N138 153 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 LYPD1Q8N2G4 141 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 ZCCHC24Q8N2G6 241 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 LINC00469Q8N7U9 141 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 SFXN5Q8TD22 340 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 STMN4Q9H169 189 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 FANCEQ9HB96 536 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 SVILO95425 2214 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
SMCHD1-205ENST00000581383 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 TRAV8-4A0A0B4J246 113 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 IGHV2OR16-5A0A0B4J2B6 119 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 J3QT63 122 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 SNAI1O95863 264 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 P01737 135 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 MAS1P04201 325 aa2.49□□□□□ -2.01
SMCHD1-205ENST00000581383 MMP7P09237 267 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms