RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PTTG3PQ9NZH4 202 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 MRPL15Q9P015 296 aaKnown RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 CMAHPQ9Y471 501 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 RNF115Q9Y4L5 304 aa6.85□□□□□ -1.31
COPS3-215ENST00000578317 USP9YO00507 2555 aaPredicted RBP6.85□□□□□ -1.31
COPS3-215ENST00000578317 LOC100506127A0A0U1RQW1 187 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 ZNF816-ZNF321PA0A0X1KG74 233 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 GGT3PA6NGU5 568 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 GMDSO60547 372 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 TMEM127O75204 238 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 IL1AP01583 271 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 HPXP02790 462 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 ALDOBP05062 364 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 GCH1P30793 250 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 MAGEB1P43366 347 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 SOX2P48431 317 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 FABP6P51161 128 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 SELENOVP59797 346 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 ERVS71-1P61550 626 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 SPOCK1Q08629 439 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 HLXQ14774 488 aaPredicted RBP6.84□□□□□ -1.31
COPS3-215ENST00000578317 CLVS2Q5SYC1 327 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 C22orf42Q6IC83 251 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 ASPHD2Q6ICH7 369 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 MEX3BQ6ZN04 569 aaKnown RBP6.84□□□□□ -1.31
COPS3-215ENST00000578317 COMMD2Q86X83 199 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 OR56B2PQ8NGI1 322 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 TSEN15Q8WW01 171 aaKnown RBP6.84□□□□□ -1.31
COPS3-215ENST00000578317 MRPL24Q96A35 216 aaKnown RBP6.84□□□□□ -1.31
COPS3-215ENST00000578317 CHST5Q9GZS9 411 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 SLC22A4Q9H015 551 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 ZCCHC4Q9H5U6 513 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 ABCB9Q9NP78 766 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 EXOSC4Q9NPD3 245 aaKnown RBP6.84□□□□□ -1.31
COPS3-215ENST00000578317 CKLFQ9UBR5 152 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 GPR160Q9UJ42 338 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 PURGQ9UJV8 347 aaKnown RBP6.84□□□□□ -1.31
COPS3-215ENST00000578317 PIGLQ9Y2B2 252 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 MPC1Q9Y5U8 109 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 PRR14LQ5THK1 2151 aa6.84□□□□□ -1.31
COPS3-215ENST00000578317 A6NNC1 897 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ANKRD30BLA7E2S9 258 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 PRSS44E7EML9 344 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 E7EQL1 145 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 H3BMQ9 156 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 CLDN1O95832 211 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 CALRP27797 417 aaKnown RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 APOBEC3AP31941 199 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 SERPINF1P36955 418 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 KLF3P57682 345 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 VBP1P61758 197 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 NCS1P62166 190 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 EFNB3Q15768 340 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ADIPOQQ15848 244 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ZNF672Q499Z4 452 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 SPATA46Q5T0L3 261 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 FAM27D1Q5T7N8 215 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 SP5Q6BEB4 398 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 OR2T2Q6IF00 324 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ZBTB34Q8NCN2 500 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 DNAAF1Q8NEP3 725 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 OR8G5Q8NG78 346 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 LILRB1Q8NHL6 650 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 SPSB1Q96BD6 273 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 C12orf43Q96C57 262 aaKnown RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 ARPC5LQ9BPX5 153 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 SLC30A2Q9BRI3 323 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 SLITRK2Q9H156 845 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 OR51B6Q9H340 312 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 PLEKHA1Q9HB21 404 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 NEK6Q9HC98 313 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 TMEM138Q9NPI0 162 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 CYSLTR2Q9NS75 346 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 CISD1Q9NZ45 108 aaKnown RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 FBXO9Q9UK97 447 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 NOP16Q9Y3C1 178 aaKnown RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 RHBDD3Q9Y3P4 386 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 CADP27708 2225 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 TRAV8-7A0A075B6U6 113 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 A0A1W2PPK0 400 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ANKRD61A6NGH8 418 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 SULT1B1O43704 296 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 LMX1BO60663 402 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 NOL3O60936 208 aaKnown RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 NRASP01111 189 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ERCC1P07992 297 aaPredicted RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 OR4A8P0C604 315 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 ZNF20P17024 532 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 RAB3AP20336 220 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 PRKACBP22694 351 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 CFPP27918 469 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 SDC2P34741 201 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 MPV17P39210 176 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 MMP15P51511 669 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 FUT6P51993 359 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 LGALS4P56470 323 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 LSM3P62310 102 aaKnown RBP6.83□□□□□ -1.32
COPS3-215ENST00000578317 UBE2V2Q15819 145 aa6.83□□□□□ -1.32
COPS3-215ENST00000578317 FAM76BQ5HYJ3 339 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms