RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 TNFRSF1AP19438 455 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 PMELP40967 661 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 CRYBB2P43320 205 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ART1P52961 327 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 GP2P55259 537 aaKnown RBP7.24□□□□□ -1.25
NUP88-211ENST00000575976 RPS25P62851 125 aaKnown RBP7.24□□□□□ -1.25
NUP88-211ENST00000575976 MPPED2Q15777 294 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 CEACAM21Q3KPI0 293 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 Q499Y3 187 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ACSM3Q53FZ2 586 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 SYT6Q5T7P8 510 aaPredicted RBP7.24□□□□□ -1.25
NUP88-211ENST00000575976 ASPHD2Q6ICH7 369 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 UNQ9370/PRO34162Q6UXP9 181 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 UTS2BQ765I0 119 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 MOGAT3Q86VF5 341 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 SERPINA12Q8IW75 414 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 MS4A15Q8N5U1 240 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 PARP16Q8N5Y8 322 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ZNF525Q8N782 197 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 CELF2-AS1Q8N7Q2 184 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 OR1M1Q8NGA1 313 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 OR5A2Q8NGI9 324 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ZNF420Q8TAQ5 688 aaPredicted RBP7.24□□□□□ -1.25
NUP88-211ENST00000575976 NPRL2Q8WTW4 380 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 PP6455Q8WZ26 134 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ORAI1Q96D31 301 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 OR14A2Q96R54 314 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 RTL8AQ9BWD3 113 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 CHST5Q9GZS9 411 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ZCCHC4Q9H5U6 513 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 ABCB9Q9NP78 766 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 UFSP2Q9NUQ7 469 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 C14orf119Q9NWQ9 140 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 DCAF16Q9NXF7 216 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 TAS2R4Q9NYW5 299 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 AKAP6Q13023 2319 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 USF3Q68DE3 2245 aa7.24□□□□□ -1.25
NUP88-211ENST00000575976 TACC2O95359 2948 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 TRBV5-7A0A0A0MS05 114 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 FAM230AA0A1W2PPH8 454 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 MAGEA13PA6NCF6 341 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 OR5B21A6NL26 309 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 ZNF879B4DU55 563 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 PIN1P1O15428 100 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 RP2O75695 350 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 SC5DO75845 299 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 GATBO75879 557 aaKnown RBP7.23□□□□□ -1.25
NUP88-211ENST00000575976 CD2P06729 351 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 CD99P14209 185 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 GATA4P43694 442 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 PDLIM4P50479 330 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 GPM6AP51674 278 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 GNG3P63215 75 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 MRPS11P82912 194 aaKnown RBP7.23□□□□□ -1.25
NUP88-211ENST00000575976 MZT1Q08AG7 82 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 ZNF154Q13106 437 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 CARTPTQ16568 116 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 CLEC12BQ2HXU8 276 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 FAM76BQ5HYJ3 339 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 Q5PR19 223 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 SHEQ5VZ18 495 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 PRSS57Q6UWY2 283 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 DNM1P46Q6ZS02 220 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 ZNF826PQ6ZT77 177 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 C11orf53Q8IXP5 236 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 OR5D14Q8NGL3 314 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 OR13C9Q8NGT0 318 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 TRMT10AQ8TBZ6 339 aaKnown RBP7.23□□□□□ -1.25
NUP88-211ENST00000575976 CCL17Q92583 94 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 RPL3LQ92901 407 aaKnown RBP7.23□□□□□ -1.25
NUP88-211ENST00000575976 MUL1Q969V5 352 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 TMEM106AQ96A25 262 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 FN3KRPQ9HA64 309 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 GCM1Q9NP62 436 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 MYOZ1Q9NP98 299 aaPredicted RBP7.23□□□□□ -1.25
NUP88-211ENST00000575976 NOX4Q9NPH5 578 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 DLL4Q9NR61 685 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 TMEM106BQ9NUM4 274 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 SLC7A11Q9UPY5 501 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 PPP1R3CQ9UQK1 317 aa7.23□□□□□ -1.25
NUP88-211ENST00000575976 IGKV1-27A0A075B6S5 117 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 IGHV4-30-2A0A087WSY4 118 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 PQLC2LA1A4F0 135 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 A6NLC8 198 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 TMEM210A6NLX4 147 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 CCRL2O00421 344 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 GABRPO00591 440 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 CDIPTO14735 213 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 SULT1B1O43704 296 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 CYB5R3P00387 301 aaPredicted RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 JUNBP17275 347 aaPredicted RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 IGFBP3P17936 291 aaPredicted RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 RAB3AP20336 220 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 AZGP1P25311 298 aaKnown RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 GABRA5P31644 462 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 TGFBR2P37173 567 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 FUT6P51993 359 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 HOXA4Q00056 320 aaPredicted RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 FABP5Q01469 135 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms