RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PTGES3LE9PB15 166 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 MYL12BO14950 172 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 ZNF205O95201 554 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 ZNF20P17024 532 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 THBS2P35442 1172 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 RBMXP38159 391 aaKnown RBP12.78□□□□□ -0.36
LITAF-217ENST00000575426 TGM4P49221 684 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 NANOS3P60323 173 aaKnown RBP12.78□□□□□ -0.36
LITAF-217ENST00000575426 KRTAP1-1Q07627 177 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 OR2G6Q5TZ20 316 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 LAIR2Q6ISS4 152 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 ZNF826PQ6ZT77 177 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 RNF166Q96A37 237 aaPredicted RBP12.78□□□□□ -0.36
LITAF-217ENST00000575426 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 BABAM2Q9NXR7 383 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 KCNS2Q9ULS6 477 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 RAB26Q9ULW5 256 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 TPRKBQ9Y3C4 175 aa12.78□□□□□ -0.36
LITAF-217ENST00000575426 TRAV38-1A0A0B4J264 116 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 ANKRD61A6NGH8 418 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 SLC1A7O00341 560 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 CDIPTO14735 213 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 LMX1BO60663 402 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 GATBO75879 557 aaKnown RBP12.77□□□□□ -0.37
LITAF-217ENST00000575426 FSTL3O95633 263 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 CCDC58Q4VC31 144 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 FAM76BQ5HYJ3 339 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 RPL22L1Q6P5R6 122 aaKnown RBP12.77□□□□□ -0.37
LITAF-217ENST00000575426 WDR86Q86TI4 376 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 SCCPDHQ8NBX0 429 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 DEFB108BQ8NET1 73 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 OR13C3Q8NGS6 347 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 OR52N1Q8NH53 320 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 ZNF671Q8TAW3 534 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 LRRC29Q8WV35 223 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 HPSE2Q8WWQ2 592 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 GATAD2BQ8WXI9 593 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 RPL3LQ92901 407 aaKnown RBP12.77□□□□□ -0.37
LITAF-217ENST00000575426 C1orf159Q96HA4 380 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 CNBD2Q96M20 576 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 TECTBQ96PL2 329 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 Q9H521 79 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 PATZ1Q9HBE1 687 aaKnown RBP12.77□□□□□ -0.37
LITAF-217ENST00000575426 TMEM165Q9HC07 324 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 MIOXQ9UGB7 285 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 HIVEP2P31629 2446 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 ABCA2Q9BZC7 2435 aa12.77□□□□□ -0.37
LITAF-217ENST00000575426 FAM157AC9JC47 383 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 E9PI62 339 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 LGALS8O00214 317 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
LITAF-217ENST00000575426 PCMT1P22061 227 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 CPT2P23786 658 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 ZNF404Q494X3 552 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 DMRTC1Q5HYR2 192 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 TMEM42Q69YG0 159 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 SFRP4Q6FHJ7 346 aaPredicted RBP12.76□□□□□ -0.37
LITAF-217ENST00000575426 WDR82Q6UXN9 313 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 GLCCI1Q86VQ1 547 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 ZNF573Q86YE8 665 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 C11orf53Q8IXP5 236 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 OR10Z1Q8NGY1 313 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 OR51F2Q8NH61 342 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 PP6455Q8WZ26 134 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 FGGYQ96C11 551 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 TMEM246Q9BRR3 403 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 TLNRD1Q9H1K6 362 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 METTL17Q9H7H0 456 aaPredicted RBP12.76□□□□□ -0.37
LITAF-217ENST00000575426 LPAR2Q9HBW0 351 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 ERVK-18Q9QC07 812 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 ERGIC3Q9Y282 383 aa12.76□□□□□ -0.37
LITAF-217ENST00000575426 FAM230AA0A1W2PPH8 454 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 OOEPA6NGQ2 149 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 CEACAM18A8MTB9 384 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 NDUFA2O43678 99 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 FOXH1O75593 365 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 MSMBP08118 114 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 OCM2P0CE71 109 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 OCMP0CE72 109 aaPredicted RBP12.75□□□□□ -0.37
LITAF-217ENST00000575426 RPS2P15880 293 aaKnown RBP12.75□□□□□ -0.37
LITAF-217ENST00000575426 CD80P33681 288 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 CFHR2P36980 270 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 GTF2A1P52655 376 aaPredicted RBP12.75□□□□□ -0.37
LITAF-217ENST00000575426 DVL1P1P54792 670 aaPredicted RBP12.75□□□□□ -0.37
LITAF-217ENST00000575426 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
LITAF-217ENST00000575426 ESCO2Q56NI9 601 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 DCDC5Q6ZRR9 648 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 NLRC3Q7RTR2 1065 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 GCSAMQ8N6F7 178 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 C19orf18Q8NEA5 215 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 TSEN15Q8WW01 171 aaKnown RBP12.75□□□□□ -0.37
LITAF-217ENST00000575426 PDCD1LG2Q9BQ51 273 aa12.75□□□□□ -0.37
LITAF-217ENST00000575426 OR51I2Q9H344 312 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms