RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, human

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USB1-215	ENST00000569252	GRP	P07492	148 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	CD55	P08174	381 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	ADH4	P08319	380 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	IRF2	P14316	349 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	PRKACB	P22694	351 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	MAGEB1	P43366	347 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	FUT6	P51993	359 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	CELF2-AS1	Q8N7Q2	184 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	UBASH3B	Q8TF42	649 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	OR5P3	Q8WZ94	311 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	GTF3A	Q92664	365 aa	Known RBP	13.61	□□□□□ -0.23
USB1-215	ENST00000569252	CPNE2	Q96FN4	548 aa	Predicted RBP	13.61	□□□□□ -0.23
USB1-215	ENST00000569252	PERP	Q96FX8	193 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	SLITRK2	Q9H156	845 aa		13.61	□□□□□ -0.23
USB1-215	ENST00000569252	ZNF701	Q9NV72	531 aa	Predicted RBP	13.61	□□□□□ -0.23
USB1-215	ENST00000569252	SON	P18583	2426 aa	Known RBP	13.6	□□□□□ -0.23
USB1-215	ENST00000569252	FAM230A	A0A1W2PPH8	454 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	OR5B21	A6NL26	309 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	TMEM210	A6NLX4	147 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	LRRC30	A6NM36	301 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	ZNF732	B4DXR9	585 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	MLNR	O43193	412 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	LMX1B	O60663	402 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	ARL6IP5	O75915	188 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	RGS9	O75916	674 aa	Predicted RBP	13.6	□□□□□ -0.23
USB1-215	ENST00000569252	HEXA	P06865	529 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	DAO	P14920	347 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	PAX1	P15863	534 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	JUNB	P17275	347 aa	Predicted RBP	13.6	□□□□□ -0.23
USB1-215	ENST00000569252	ATF1	P18846	271 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	RAB3A	P20336	220 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	TGFBR2	P37173	567 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	CD200	P41217	278 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	PTH2R	P49190	550 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	GNG3	P63215	75 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	HFE	Q30201	348 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252		Q5PR19	223 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	UTS2B	Q765I0	119 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	KRT74	Q7RTS7	529 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	PARP16	Q8N5Y8	322 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	OR11L1	Q8NGX0	322 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	ITLN1	Q8WWA0	313 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	PHYHIP	Q92561	330 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	RDH5	Q92781	318 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	MUL1	Q969V5	352 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	ERGIC1	Q969X5	290 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	ADAT3	Q96EY9	351 aa	Predicted RBP	13.6	□□□□□ -0.23
USB1-215	ENST00000569252	BORCS8	Q96FH0	119 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	MEGF10	Q96KG7	1140 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	SORCS2	Q96PQ0	1159 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	OR14A2	Q96R54	314 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	GSX2	Q9BZM3	304 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	CHST5	Q9GZS9	411 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	FN3KRP	Q9HA64	309 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	TCF7L1	Q9HCS4	588 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.6	□□□□□ -0.23
USB1-215	ENST00000569252	SSR3	Q9UNL2	185 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	PPP1R3C	Q9UQK1	317 aa		13.6	□□□□□ -0.23
USB1-215	ENST00000569252	DSCAM	O60469	2012 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	TRBV5-5	A0A0J9YX44	114 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252		A0A1B0GWJ7	208 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252		A0A1W2PPK0	400 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252		A6NLC8	198 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	IFNL4	K9M1U5	179 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	SSX4	O60224	188 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	HCK	P08631	526 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	CD36	P16671	472 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	GPM6A	P51674	278 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	ATP1B3	P54709	279 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	RPS25	P62851	125 aa	Known RBP	13.59	□□□□□ -0.23
USB1-215	ENST00000569252	CARTPT	Q16568	116 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	TIMM50	Q3ZCQ8	353 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	TMEM42	Q69YG0	159 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	PEG10	Q86TG7	708 aa	Known RBP	13.59	□□□□□ -0.23
USB1-215	ENST00000569252	ZNF573	Q86YE8	665 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	LRRC75A-AS1	Q8N1F1	130 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	OR13C5	Q8NGS8	318 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	IGFBPL1	Q8WX77	278 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	RGP1	Q92546	391 aa	Predicted RBP	13.59	□□□□□ -0.23
USB1-215	ENST00000569252	CCL17	Q92583	94 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	HPS1	Q92902	700 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	DVL3	Q92997	716 aa	Predicted RBP	13.59	□□□□□ -0.23
USB1-215	ENST00000569252	SPSB1	Q96BD6	273 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	ITPKC	Q96DU7	683 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	EXOSC4	Q9NPD3	245 aa	Known RBP	13.59	□□□□□ -0.23
USB1-215	ENST00000569252	NDUFB11	Q9NX14	153 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	GSTK1	Q9Y2Q3	226 aa		13.59	□□□□□ -0.23
USB1-215	ENST00000569252	ROS1	P08922	2347 aa		13.58	□□□□□ -0.23
USB1-215	ENST00000569252	IGHV1-69-2	A0A0G2JMI3	117 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	TRIM64C	A6NLI5	447 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	INAFM1	C9JVW0	142 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	SULT1B1	O43704	296 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	CDC14B	O60729	498 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	CYB5A	P00167	134 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	GAL	P22466	123 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	CRYBB2	P43320	205 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	RBP2	P50120	134 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	MTCP1	P56278	107 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	DSCR9	P59020	149 aa		13.58	□□□□□ -0.24
USB1-215	ENST00000569252	RPS11	P62280	158 aa	Known RBP eCLIP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms