RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 Q8N2B8 174 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 RPL3LQ92901 407 aaKnown RBP12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 PGAM5Q96HS1 289 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 HIST1H2AAQ96QV6 131 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 CCDC134Q9H6E4 229 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNF446Q9NWS9 450 aa12.8□□□□□ -0.36
HERPUD1-215ENST00000568676 VGLL3A8MV65 326 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 HSD17B1P14061 328 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 DCTDP32321 178 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 LGALS4P56470 323 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 GMFBP60983 142 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 GFOD2Q3B7J2 385 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 SAMD4BQ5PRF9 694 aaKnown RBP12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 KCTD8Q6ZWB6 473 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 ZDHHC23Q8IYP9 409 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 OR2T33Q8NG76 320 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 R3HDM4Q96D70 268 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 SDSLQ96GA7 329 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 AJUBAQ96IF1 538 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 RNF170Q96K19 258 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 NSMCE2Q96MF7 247 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 INTS14Q96SY0 518 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 ABHD6Q9BV23 337 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 TBC1D23Q9NUY8 699 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 AURKAIP1Q9NWT8 199 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 V9GYQ6 96 aa12.79□□□□□ -0.36
HERPUD1-215ENST00000568676 RIIAD1A6NNX1 92 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNF850A8MQ14 1090 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 GYPBP06028 91 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 H2BFMP0C1H6 154 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNF3P17036 446 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 PRDX6P30041 224 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 OPRL1P41146 370 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 GABRA2P47869 451 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 NSUN5P1Q3KNT7 163 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 LINC01590Q5TEZ4 76 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 KRT74Q7RTS7 529 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 FAM185AQ8N0U4 392 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 OR6N2Q8NGY6 317 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 ZNF671Q8TAW3 534 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 C17orf50Q8WW18 174 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 RORBQ92753 470 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 PHF21AQ96BD5 680 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 BTBD10Q9BSF8 475 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 TSSK6Q9BXA6 273 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 PPP1R3EQ9H7J1 279 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 NIPAL2Q9H841 368 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 DNAJC27Q9NZQ0 273 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
HERPUD1-215ENST00000568676 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 PSG2P11465 335 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 GNG3P63215 75 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 CALHM1Q8IU99 346 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 ERI1Q8IV48 349 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 RNF148Q8N7C7 305 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNRF1Q8ND25 227 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 OR8D4Q8NGM9 314 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 PIGCQ92535 297 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 MMP28Q9H239 520 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF702PQ9H963 129 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 CMC2Q9NRP2 79 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 USE1Q9NZ43 259 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF319Q9P2F9 582 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF222Q9UK12 451 aa12.77□□□□□ -0.37
HERPUD1-215ENST00000568676 TNFRSF11BO00300 401 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 CHST1O43916 411 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 PEX14O75381 377 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 ALDOBP05062 364 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 ACKR3P25106 362 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 GSTT1P30711 240 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 ERVFRD-1P60508 538 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 RPL31P62899 125 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 THAP5Q7Z6K1 395 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 MKXQ8IYA7 352 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF561Q8N587 486 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 WFDC9Q8NEX5 89 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 OR9Q2Q8NGE9 314 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 HPSE2Q8WWQ2 592 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 NKX3-1Q99801 234 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 BRD7Q9NPI1 651 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 TCF19Q9Y242 345 aa12.76□□□□□ -0.37
HERPUD1-215ENST00000568676 FAM90A8PA6NJQ4 464 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 OR5B21A6NL26 309 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 SLC1A7O00341 560 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 CCNB2O95067 398 aa12.75□□□□□ -0.37
HERPUD1-215ENST00000568676 GASTP01350 101 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms