RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ADGRG5Q8IZF4 528 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 C8orf46Q8TAG6 207 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 ZNF671Q8TAW3 534 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 DNAJC9Q8WXX5 260 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 RNF170Q96K19 258 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 DCTN5Q9BTE1 182 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 PRRG3Q9BZD7 231 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 LAMP5Q9UJQ1 280 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 TMEM14AQ9Y6G1 99 aa15.34■□□□□ 0.05
LINC01238-205ENST00000567549 A0A0U1RQK1 487 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 A0A1W2PQ09 198 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 C5orf63A6NC05 138 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 M0R1W7 72 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 CASQ2O14958 399 aaPredicted RBP15.33■□□□□ 0.04
LINC01238-205ENST00000567549 ANXA8P13928 327 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 TGFBR2P37173 567 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 TGM4P49221 684 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 CAV3P56539 151 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 DEFA6Q01524 100 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 ACSM1Q08AH1 577 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 IKZF1Q13422 519 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 LCN1P1Q5VSP4 162 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 STUMQ69YW2 141 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 DEGS2Q6QHC5 323 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 C11orf53Q8IXP5 236 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 OR5D13Q8NGL4 314 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 OR5P3Q8WZ94 311 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 PIGCQ92535 297 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 PKP2Q99959 881 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 NIPSNAP1Q9BPW8 284 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 CHID1Q9BWS9 393 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 FAM234AQ9H0X4 552 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 METTL8Q9H825 291 aaKnown RBP15.33■□□□□ 0.04
LINC01238-205ENST00000567549 MED20Q9H944 212 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 SLC25A10Q9UBX3 287 aaPredicted RBP15.33■□□□□ 0.04
LINC01238-205ENST00000567549 VPREB3Q9UKI3 123 aa15.33■□□□□ 0.04
LINC01238-205ENST00000567549 TRBV23-1A0A0A0MS06 115 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 ZNF816-ZNF321PA0A0X1KG74 233 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 hCG_1809904A0A1W2PP81 198 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 A0A1W2PPE2 198 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 A0A1W2PR64 198 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 A0A1W2PRV1 198 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 ZNF850A8MQ14 1090 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 CLPXO76031 633 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 IGHV4-59P01825 116 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 OSMP13725 252 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 FASP25445 335 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 GNG3P63215 75 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 POU4F2Q12837 409 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 TAF9Q16594 264 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 MIDNQ504T8 468 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
LINC01238-205ENST00000567549 PLBD1Q6P4A8 553 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 THAP5Q7Z6K1 395 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 WDR86Q86TI4 376 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 COMMD2Q86X83 199 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 FAM216BQ8N7L0 139 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 MROQ9BYG7 248 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 TCF7L1Q9HCS4 588 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 PDP1Q9P0J1 537 aaPredicted RBP15.32■□□□□ 0.04
LINC01238-205ENST00000567549 ZNRD1Q9P1U0 126 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 NLKQ9UBE8 527 aa15.32■□□□□ 0.04
LINC01238-205ENST00000567549 PKD1L1Q8TDX9 2849 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 A0A0U1RQV5 110 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 OR5B21A6NL26 309 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 NPFFO15130 113 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 ZNF254O75437 659 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 MTRF1O75570 445 aaKnown RBP15.31■□□□□ 0.04
LINC01238-205ENST00000567549 NDUFB7P17568 137 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 GLRA1P23415 457 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 UBE2E1P51965 193 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 HOXA4Q00056 320 aaPredicted RBP15.31■□□□□ 0.04
LINC01238-205ENST00000567549 GINS1Q14691 196 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 ZNF829Q3KNS6 432 aaPredicted RBP15.31■□□□□ 0.04
LINC01238-205ENST00000567549 FAM76BQ5HYJ3 339 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 ZBTB37Q5TC79 503 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 ZNF788Q6ZQV5 615 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 IQCF1Q8N6M8 205 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 ASB17Q8WXJ9 295 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 YIPF3Q9GZM5 350 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 C16orf95Q9H693 158 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 SIRT7Q9NRC8 400 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 VNN3Q9NY84 501 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 RASL12Q9NYN1 266 aa15.31■□□□□ 0.04
LINC01238-205ENST00000567549 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC01238-205ENST00000567549 SF3B6Q9Y3B4 125 aaKnown RBP15.31■□□□□ 0.04
LINC01238-205ENST00000567549 ANKRD61A6NGH8 418 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 OR2AT4A6NND4 320 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 SIGLEC5O15389 551 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 ANOS1P23352 680 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 DCTDP32321 178 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 RELBQ01201 579 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 C11orf88Q6PI97 169 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 PDZD9Q8IXQ8 264 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 ZSCAN4Q8NAM6 433 aaPredicted RBP15.3■□□□□ 0.04
LINC01238-205ENST00000567549 LINC01006Q8NI28 216 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 NRG4Q8WWG1 115 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 RPL3LQ92901 407 aaKnown RBP15.3■□□□□ 0.04
LINC01238-205ENST00000567549 RAB18Q9NP72 206 aa15.3■□□□□ 0.04
LINC01238-205ENST00000567549 LRRC42Q9Y546 428 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms