RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SRPXP78539 464 aa11.25□□□□□ -0.61
COMMD4-209ENST00000564068 FAHD2BQ6P2I3 314 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-209ENST00000564068 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
COMMD4-209ENST00000564068 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
COMMD4-209ENST00000564068 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-209ENST00000564068 FAHD2AQ96GK7 314 aa11.25□□□□□ -0.61
COMMD4-209ENST00000564068 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
COMMD4-209ENST00000564068 UBE2ZQ9H832 354 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-209ENST00000564068 GCM1Q9NP62 436 aa11.25□□□□□ -0.61
COMMD4-209ENST00000564068 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
COMMD4-209ENST00000564068 FAM24AA6NFZ4 105 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 RER1O15258 196 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 AADACP22760 399 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 LPAL2Q16609 132 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 UNQ9370/PRO34162Q6UXP9 181 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 SLC36A1Q7Z2H8 476 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 GDF15Q99988 308 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 SMIM7Q9BQ49 75 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 DICER1Q9UPY3 1922 aaKnown RBP11.24□□□□□ -0.61
COMMD4-209ENST00000564068 CCDC187A0A096LP49 1063 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 UPK3AO75631 287 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 ACTL6AO96019 429 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 H3F3AP84243 136 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF141Q15928 474 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 RTL10Q7L3V2 364 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 LHX4Q969G2 390 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 A0A087WV48 116 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 PDGFBP01127 241 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-209ENST00000564068 VSIG8P0DPA2 414 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 HBG1P69891 147 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 HBG2P69892 147 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 OR2B11Q5JQS5 317 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 ZNRF4Q8WWF5 429 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 PSMF1Q92530 271 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 KCNK7Q9Y2U2 307 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 PARP14Q460N5 1801 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 KLF4O43474 513 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 SPRY1O43609 319 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-209ENST00000564068 ZBTB25P24278 435 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 PRSS12P56730 875 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 HTD2P86397 168 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 SKP2Q13309 424 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 BCO1Q9HAY6 547 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 FGF21Q9NSA1 209 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 OR14J1Q9UGF5 321 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 ICAM5Q9UMF0 924 aa11.24□□□□□ -0.61
COMMD4-209ENST00000564068 EFSO43281 561 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 PNPP00491 289 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 KISS1Q15726 138 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF66Q6ZN08 573 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 LINC00469Q8N7U9 141 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 ANKRD9Q96BM1 317 aaPredicted RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 RARRES3Q9UL19 164 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 CUL9Q8IWT3 2517 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 OR2J2O76002 312 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 IGKV1D-16P01601 117 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 CD79AP11912 226 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 PEBP1P30086 187 aaKnown RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 GFERP55789 205 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 TAS2R30P59541 319 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 GRB2P62993 217 aaKnown RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 C16orf47Q6ZP98 133 aaPredicted RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 SPRED2Q7Z698 418 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 VSTM2LQ96N03 204 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 VN1R1Q9GZP7 353 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 OR51M1Q9H341 326 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 SERTAD4Q9NUC0 356 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 NYNRINQ9P2P1 1898 aaKnown RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 TRAPPC2LH3BP13 241 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 TNFRSF10CO14798 259 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 F10P00742 488 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 OR5AC1P0C628 307 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 LPAR6P43657 344 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 RBP2P50120 134 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 ETV3LQ6ZN32 361 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 DGAT2L6Q6ZPD8 337 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 ATG4DQ86TL0 474 aaPredicted RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 BAGE3Q86Y29 109 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 BAGE2Q86Y30 109 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 MRPL24Q96A35 216 aaKnown RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 LIN37Q96GY3 246 aaPredicted RBP11.23□□□□□ -0.61
COMMD4-209ENST00000564068 FAAP24Q9BTP7 215 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 MMACHCQ9Y4U1 282 aa11.23□□□□□ -0.61
COMMD4-209ENST00000564068 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 SEC14L6B5MCN3 397 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 M0R135 149 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 LAMTOR5O43504 91 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ZFAND5O76080 213 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 TBX6O95947 436 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-209ENST00000564068 PSMB3P49720 205 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 GGTLC2Q14390 218 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 PNLIPRP3Q17RR3 467 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 RPS4Y2Q8TD47 263 aa11.22□□□□□ -0.61
COMMD4-209ENST00000564068 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms