RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 OR11L1Q8NGX0 322 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 TRMT10AQ8TBZ6 339 aaKnown RBP15.93■□□□□ 0.14
RAB40C-207ENST00000563109 HPS1Q92902 700 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 MUL1Q969V5 352 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 SPSB1Q96BD6 273 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 MRPS26Q9BYN8 205 aaKnown RBP15.93■□□□□ 0.14
RAB40C-207ENST00000563109 CHODLQ9H9P2 273 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 NDUFB11Q9NX14 153 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 ITGB1BP2Q9UKP3 347 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 TACC2O95359 2948 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 LOC100289279A0A1B0GTE1 492 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 LRRC30A6NM36 301 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 SULT1B1O43704 296 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 RGS9O75916 674 aaPredicted RBP15.92■□□□□ 0.14
RAB40C-207ENST00000563109 PTBP3O95758 552 aaKnown RBP15.92■□□□□ 0.14
RAB40C-207ENST00000563109 IRF2P14316 349 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 ATF1P18846 271 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 THBS2P35442 1172 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 UBE2V2Q15819 145 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 ACSM3Q53FZ2 586 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 SPRNQ5BIV9 151 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 SYT6Q5T7P8 510 aaPredicted RBP15.92■□□□□ 0.14
RAB40C-207ENST00000563109 PRSS57Q6UWY2 283 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 OR1M1Q8NGA1 313 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 NPRL2Q8WTW4 380 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 FAM168AQ92567 244 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 CCL17Q92583 94 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 TMEM203Q969S6 136 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 BORCS8Q96FH0 119 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 DERL3Q96Q80 235 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 GCM1Q9NP62 436 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 UFSP2Q9NUQ7 469 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 TAS2R4Q9NYW5 299 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 POLQO75417 2590 aa15.92■□□□□ 0.14
RAB40C-207ENST00000563109 FAM230AA0A1W2PPH8 454 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 hCG_1807616A0A1W2PRN6 198 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 LRP5LA4QPB2 252 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 TRIM64CA6NLI5 447 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 CLDN25C9JDP6 229 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 MAGEB3O15480 346 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 HCKP08631 526 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 RAB3AP20336 220 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 AZGP1P25311 298 aaKnown RBP15.91■□□□□ 0.14
RAB40C-207ENST00000563109 FUT6P51993 359 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 ZNF154Q13106 437 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 SSX1Q16384 188 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 CLEC12BQ2HXU8 276 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 DMRTC1Q5HYR2 192 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 DNAAF1Q8NEP3 725 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 YIPF5Q969M3 257 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 CPNE2Q96FN4 548 aaPredicted RBP15.91■□□□□ 0.14
RAB40C-207ENST00000563109 PIMREGQ9BSJ6 248 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 C1orf123Q9NWV4 160 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 TREM2Q9NZC2 230 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 DYSFO75923 2080 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 ITPR2Q14571 2701 aa15.91■□□□□ 0.14
RAB40C-207ENST00000563109 NAV2Q8IVL1 2488 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 TRBV5-7A0A0A0MS05 114 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 PQLC2LA1A4F0 135 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 LYNX1G3V0Z9 82 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 NDUFS8O00217 210 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 SMIM18P0DKX4 95 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 LYNX1P0DP58 116 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 FSTP19883 344 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 COL8A2P25067 703 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 GP2P55259 537 aaKnown RBP15.9■□□□□ 0.14
RAB40C-207ENST00000563109 MPPED2Q15777 294 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 LHFPL2Q6ZUX7 228 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 CEACAM19Q7Z692 300 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 PEG10Q86TG7 708 aaKnown RBP15.9■□□□□ 0.14
RAB40C-207ENST00000563109 WDR86Q86TI4 376 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 ZNF573Q86YE8 665 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 C1orf87Q8N0U7 546 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 ZNF420Q8TAQ5 688 aaPredicted RBP15.9■□□□□ 0.14
RAB40C-207ENST00000563109 Q8TCH9 128 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 TIMD4Q96H15 378 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 FGF23Q9GZV9 251 aaPredicted RBP15.9■□□□□ 0.14
RAB40C-207ENST00000563109 NOX4Q9NPH5 578 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 TMEM106BQ9NUM4 274 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 CACNG2Q9Y698 323 aa15.9■□□□□ 0.14
RAB40C-207ENST00000563109 A0A1W2PPK0 400 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 RP2O75695 350 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 ALX3O95076 343 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 JUNBP17275 347 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-207ENST00000563109 RBP2P50120 134 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 ATP1B3P54709 279 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 ZNF181Q2M3W8 571 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 PHYHIPQ92561 330 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 RPL3LQ92901 407 aaKnown RBP15.89■□□□□ 0.13
RAB40C-207ENST00000563109 TLNRD1Q9H1K6 362 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 OR51I2Q9H344 312 aa15.89■□□□□ 0.13
RAB40C-207ENST00000563109 SF3B6Q9Y3B4 125 aaKnown RBP15.89■□□□□ 0.13
RAB40C-207ENST00000563109 IGKV1-9A0A0C4DH69 117 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 GABRPO00591 440 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 PPIHO43447 177 aaKnown RBP15.88■□□□□ 0.13
RAB40C-207ENST00000563109 SC5DO75845 299 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 ARL6IP5O75915 188 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 TGFBR2P37173 567 aa15.88■□□□□ 0.13
RAB40C-207ENST00000563109 GPR6P46095 362 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-207ENST00000563109 HAAOP46952 286 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms