RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZNF420Q8TAQ5 688 aaPredicted RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 CCL17Q92583 94 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
CDH1-204ENST00000562118 CNBD2Q96M20 576 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 TECTBQ96PL2 329 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 MICU1Q9BPX6 476 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 RTL8AQ9BWD3 113 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 OR51I2Q9H344 312 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 Q9H521 79 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 FN3KRPQ9HA64 309 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 TRIM36Q9NQ86 728 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 GTF2A1LQ9UNN4 478 aa11.28□□□□□ -0.6
CDH1-204ENST00000562118 NF1P21359 2839 aa11.27□□□□□ -0.6
CDH1-204ENST00000562118 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.6
CDH1-204ENST00000562118 TRBV5-5A0A0J9YX44 114 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 LRP5LA4QPB2 252 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 ANKRD61A6NGH8 418 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.61
CDH1-204ENST00000562118 PPIHO43447 177 aaKnown RBP11.27□□□□□ -0.61
CDH1-204ENST00000562118 ACAA1P09110 424 aaPredicted RBP11.27□□□□□ -0.61
CDH1-204ENST00000562118 BTG1P62324 171 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 GNG3P63215 75 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 ZMYND11Q15326 602 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 UBE2V2Q15819 145 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 TEX36Q5VZQ5 186 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 ASPHD2Q6ICH7 369 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 WDR82Q6UXN9 313 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 COMMD2Q86X83 199 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 GCSAMQ8N6F7 178 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 DNAAF1Q8NEP3 725 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 OR10Z1Q8NGY1 313 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 OR8S1Q8NH09 359 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 OR5AK2Q8NH90 309 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 GATAD2BQ8WXI9 593 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 PIGCQ92535 297 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 RAB1CQ92928 201 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 PDCD1LG2Q9BQ51 273 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 MND1Q9BWT6 205 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 YTHDF1Q9BYJ9 559 aaKnown RBP11.27□□□□□ -0.61
CDH1-204ENST00000562118 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
CDH1-204ENST00000562118 ERVK-18Q9QC07 812 aa11.27□□□□□ -0.61
CDH1-204ENST00000562118 ZFHX3Q15911 3703 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 IGKV1-9A0A0C4DH69 117 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 TRBV2A0A0J9YWF9 115 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 LRRC30A6NM36 301 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 SRRM5B3KS81 715 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 MYL12BO14950 172 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 RGS10O43665 173 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 IGHV4-31P0DP07 118 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 IL2RGP31785 369 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 RBMXP38159 391 aaKnown RBP11.26□□□□□ -0.61
CDH1-204ENST00000562118 TBCEQ15813 527 aaPredicted RBP11.26□□□□□ -0.61
CDH1-204ENST00000562118 ODF4Q2M2E3 257 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 ZNF404Q494X3 552 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 LURAP1LQ8IV03 231 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 TIMD4Q96H15 378 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 COMMD4Q9H0A8 199 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 ISYNA1Q9NPH2 558 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 TREM2Q9NZC2 230 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
CDH1-204ENST00000562118 LRRC42Q9Y546 428 aa11.26□□□□□ -0.61
CDH1-204ENST00000562118 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.61
CDH1-204ENST00000562118 A8MXK9 166 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 PTGES3LE9PB15 166 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 CD5LO43866 347 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 NOS1APO75052 506 aaPredicted RBP11.25□□□□□ -0.61
CDH1-204ENST00000562118 SC5DO75845 299 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 GATBO75879 557 aaKnown RBP11.25□□□□□ -0.61
CDH1-204ENST00000562118 CYB5R3P00387 301 aaPredicted RBP11.25□□□□□ -0.61
CDH1-204ENST00000562118 HEXAP06865 529 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
CDH1-204ENST00000562118 GPM6AP51674 278 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 GPR50Q13585 617 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 CARTPTQ16568 116 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 YIF1BQ5BJH7 314 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 CEP78Q5JTW2 689 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 MUC20Q8N307 709 aaPredicted RBP11.25□□□□□ -0.61
CDH1-204ENST00000562118 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 SCCPDHQ8NBX0 429 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 MAPK1IP1LQ8NDC0 245 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 OR11L1Q8NGX0 322 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 AQP3Q92482 292 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 RNF170Q96K19 258 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 OR5M11Q96RB7 305 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 ZNF281Q9Y2X9 895 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 MXRA5Q9NR99 2828 aa11.25□□□□□ -0.61
CDH1-204ENST00000562118 IGKV1-27A0A075B6S5 117 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 ZNF732B4DXR9 585 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 GPX5O75715 221 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 EGR1P18146 543 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 SPHARQ15513 63 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 AVPI1Q5T686 147 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms