RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CKLFQ9UBR5 152 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 TP53TG5Q9Y2B4 290 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 GTF3C1Q12789 2109 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 hCG_38984A0A1B0GV85 526 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TMEM14DPA8MWL7 114 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 GABARAPH6UMI1 98 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 EEF1E1O43324 174 aaKnown RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TNFSF13O75888 250 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 KRT33AO76009 404 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TOXO94900 526 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 KDM4BO94953 1096 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 FARS2O95363 451 aaKnown RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 PRB1P04280 392 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TMEM11P17152 192 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 RAB3AP20336 220 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 RAB6AP20340 208 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 COX5AP20674 150 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 IGHV1-2P23083 117 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 ALDH3B1P43353 468 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TDGF1P3P51864 188 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TAS2R20P59543 309 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 FAM3AP98173 230 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 FOXF2Q12947 444 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 UNC119Q13432 240 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 GPR176Q14439 515 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 OR8B8Q15620 311 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 LINC00303Q3SY05 128 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 PLA1AQ53H76 456 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 ATPAF1Q5TC12 328 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 C9orf135Q5VTT2 229 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 PGAP1Q75T13 922 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 FAM214BQ7L5A3 538 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 DPPA2Q7Z7J5 298 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 MCEMP1Q8IX19 187 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF100Q8IYN0 542 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF610Q8N9Z0 462 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 DUSP18Q8NEJ0 188 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 OR52I2Q8NH67 350 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 OR2AE1Q8NHA4 323 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 MBD3L2Q8NHZ7 208 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 RFT1Q96AA3 541 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 RCC1LQ96I51 464 aaKnown RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TRIB1Q96RU8 372 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 CHST5Q9GZS9 411 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 OR10A2Q9H208 303 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 AUNIPQ9H7T9 357 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 RBFOX1Q9NWB1 397 aaKnown RBP5.65□□□□□ -1.5
CAPN3-210ENST00000561817 TAS2R3Q9NYW6 316 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 COQ3Q9NZJ6 369 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 UPB1Q9UBR1 384 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 FAM215AQ9Y5M1 114 aa5.65□□□□□ -1.5
CAPN3-210ENST00000561817 MYO7BQ6PIF6 2116 aa5.65□□□□□ -1.51
CAPN3-210ENST00000561817 BOD1L1Q8NFC6 3051 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 KMT2BQ9UMN6 2715 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-210ENST00000561817 A0A0A6YYD4 124 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 A0A0A6YYH2 397 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 A0A0B4J293 547 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 A0A0U1RQK1 487 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF320A2RRD8 509 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 MEIOCA2RUB1 952 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 GGT3PA6NGU5 568 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 A6NJ64 397 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 FOXI3A8MTJ6 420 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-210ENST00000561817 LYRM1O43325 122 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ORC5O43913 435 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 LCATP04180 440 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ERCC1P07992 297 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-210ENST00000561817 CD3GP09693 182 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 PTHLHP12272 177 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ARSBP15848 533 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 FAHP16930 419 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF20P17024 532 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 SLC6A1P30531 599 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ARR3P36575 388 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 SLC6A9P48067 706 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 RAB1AP62820 205 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 MRPS10P82664 201 aaKnown RBP5.64□□□□□ -1.51
CAPN3-210ENST00000561817 PITPNAQ00169 270 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF92Q03936 586 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 GABRA6Q16445 453 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 TBRG1Q3YBR2 411 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 HIKESHIQ53FT3 197 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 TOR2AQ5JU69 321 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 TRIQKQ629K1 86 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 OR10K2Q6IF99 312 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 VWA1Q6PCB0 445 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 ASCL4Q6XD76 172 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 Q6ZT83 130 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 P4HA3Q7Z4N8 544 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 LUZP2Q86TE4 346 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 GLCCI1Q86VQ1 547 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 GCNT2Q8N0V5 402 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 GABRG1Q8N1C3 465 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 JAGN1Q8N5M9 183 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 WDR31Q8NA23 367 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 OR6K3Q8NGY3 331 aa5.64□□□□□ -1.51
CAPN3-210ENST00000561817 SUN5Q8TC36 379 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms