RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RNF170Q96K19 258 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 HIST1H2AAQ96QV6 131 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 RTL8AQ9BWD3 113 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 MND1Q9BWT6 205 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 CHST5Q9GZS9 411 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 FGF23Q9GZV9 251 aaPredicted RBP8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 COMMD4Q9H0A8 199 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 FN3KRPQ9HA64 309 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 ISYNA1Q9NPH2 558 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 ERVK-18Q9QC07 812 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 WIPI2Q9Y4P8 454 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 NPTNQ9Y639 398 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 SIRT4Q9Y6E7 314 aaPredicted RBP8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 CSPG4Q6UVK1 2322 aa8.11□□□□□ -1.11
RABGGTA-221ENST00000561055 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 ANKRD61A6NGH8 418 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 LRRC30A6NM36 301 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 MYL12BO14950 172 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 PPIHO43447 177 aaKnown RBP8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 GATBO75879 557 aaKnown RBP8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 ACAA1P09110 424 aaPredicted RBP8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 THBS2P35442 1172 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 CHN2P52757 468 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 GPR50Q13585 617 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 SPHARQ15513 63 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 CARTPTQ16568 116 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 TMEM155Q4W5P6 130 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 MOB3CQ70IA8 216 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 PEG10Q86TG7 708 aaKnown RBP8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 MOGAT3Q86VF5 341 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 DNAAF1Q8NEP3 725 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 OR51A4Q8NGJ6 313 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 OR11L1Q8NGX0 322 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 OR10Z1Q8NGY1 313 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 OR10AC1Q8NH08 325 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 DVL3Q92997 716 aaPredicted RBP8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 TIMD4Q96H15 378 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 PGLYRP3Q96LB9 341 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 PDCD1LG2Q9BQ51 273 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 OR51I2Q9H344 312 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 PLEKHA1Q9HB21 404 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 DCAF16Q9NXF7 216 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
RABGGTA-221ENST00000561055 TLN2Q9Y4G6 2542 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 PQLC2LA1A4F0 135 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 LRP5LA4QPB2 252 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 SRRM5B3KS81 715 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 ZNF732B4DXR9 585 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 LMX1BO60663 402 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 SERPINA3P01011 423 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 MT-ND2P03891 347 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 GRPP07492 148 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 MPZP25189 248 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 FUT6P51993 359 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 LMO4P61968 165 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 RPS11P62280 158 aaKnown RBP eCLIP8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 BTG1P62324 171 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 DOC2BQ14184 412 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 TBCEQ15813 527 aaPredicted RBP8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 UBE2V2Q15819 145 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 YIF1BQ5BJH7 314 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 PLCXD3Q63HM9 321 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 ZNF529Q6P280 563 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 WDR82Q6UXN9 313 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 BIVMQ86UB2 503 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 SERPINA12Q8IW75 414 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 GCSAMQ8N6F7 178 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 SCCPDHQ8NBX0 429 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 CLDND2Q8NHS1 167 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 GPR148Q8TDV2 347 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 RGP1Q92546 391 aaPredicted RBP8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 GHSRQ92847 366 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 FGGYQ96C11 551 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 ADAT3Q96EY9 351 aaPredicted RBP8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 UFSP2Q9NUQ7 469 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 C1orf123Q9NWV4 160 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 TREM2Q9NZC2 230 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 ZNF281Q9Y2X9 895 aa8.09□□□□□ -1.11
RABGGTA-221ENST00000561055 PPIAL4EA0A075B759 164 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 IGKV1-9A0A0C4DH69 117 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 TRBV5-5A0A0J9YX44 114 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 A6NIN4 97 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 PPIAL4DF5H284 164 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 TNFRSF13BO14836 293 aaPredicted RBP8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 WNT9BO14905 357 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 NOS1APO75052 506 aaPredicted RBP8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 GPX5O75715 221 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 CYB5R3P00387 301 aaPredicted RBP8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 PPIAL4FP0DN26 164 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 IRF2P14316 349 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 ATF1P18846 271 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 CELP19835 753 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 MDH2P40926 338 aaKnown RBP8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 GPM6AP51674 278 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 KRTAP1-1Q07627 177 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 TPBGQ13641 420 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 ZMYND11Q15326 602 aa8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 CNN3Q15417 329 aaKnown RBP8.08□□□□□ -1.12
RABGGTA-221ENST00000561055 TMEM249Q2WGJ8 235 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms