RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 EGFEM1PQ0D2K5 195 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 FAM185AQ8N0U4 392 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 FAM86B1Q8N7N1 296 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 RP9Q8TA86 221 aaKnown RBP14.96□□□□□ -0.01
TPM1-226ENST00000560959 RPS4Y2Q8TD47 263 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 MALSU1Q96EH3 234 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 OR10A2Q9H208 303 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 RHBDL1O75783 438 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 GADD45GO95257 159 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 TFF1P04155 84 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 GLRA1P23415 457 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 HSD11B1P28845 292 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 MSX2P35548 267 aaPredicted RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 GABRA2P47869 451 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 BLVRAP53004 296 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 SLC25A1P53007 311 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 TSPAN31Q12999 210 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 RPL13AP3Q6NVV1 102 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 C8orf82Q6P1X6 216 aaPredicted RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 LYPD4Q6UWN0 246 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 CALHM1Q8IU99 346 aa14.95□□□□□ -0.02
TPM1-226ENST00000560959 FOXRED1Q96CU9 486 aaPredicted RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 ELL3Q9HB65 397 aaPredicted RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 DCAF13Q9NV06 445 aaKnown RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 SAMD4AQ9UPU9 718 aaKnown RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 TBL2Q9Y4P3 447 aaKnown RBP14.95□□□□□ -0.02
TPM1-226ENST00000560959 WI2-2373I1.2A0A1W2PRP0 233 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 DHRS12A0PJE2 317 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 E9PQ18 207 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 DIRAS1O95057 198 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 DYNLT3P51808 116 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 KRTAP10-11P60412 298 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 ERVFRD-1P60508 538 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 RPL31P62899 125 aaKnown RBP14.94□□□□□ -0.02
TPM1-226ENST00000560959 PRDX4Q13162 271 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 DCTN2Q13561 401 aaKnown RBP14.94□□□□□ -0.02
TPM1-226ENST00000560959 KRT74Q7RTS7 529 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 TMEM185AQ8NFB2 350 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 GNPDA2Q8TDQ7 276 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 RNF170Q96K19 258 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 ABCB10Q9NRK6 738 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 C19orf12Q9NSK7 152 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 RASL12Q9NYN1 266 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 USE1Q9NZ43 259 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 ZNF319Q9P2F9 582 aa14.94□□□□□ -0.02
TPM1-226ENST00000560959 ZNF850A8MQ14 1090 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 HMGB1P1B2RPK0 211 aaPredicted RBP14.93□□□□□ -0.02
TPM1-226ENST00000560959 PF4V1P10720 104 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 ZNF121P58317 390 aaPredicted RBP14.93□□□□□ -0.02
TPM1-226ENST00000560959 TMEM200BQ69YZ2 307 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 FAM57BQ71RH2 274 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 TIGD4Q8IY51 512 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 ZNF511Q8NB15 262 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 SLC37A3Q8NCC5 494 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 OR5AU1Q8NGC0 362 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 OR52L1Q8NGH7 329 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 OR51L1Q8NGJ5 315 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 ZNF671Q8TAW3 534 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 RNF133Q8WVZ7 376 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 KCTD14Q9BQ13 255 aaPredicted RBP14.93□□□□□ -0.02
TPM1-226ENST00000560959 IL20Q9NYY1 176 aa14.93□□□□□ -0.02
TPM1-226ENST00000560959 F2RL2O00254 374 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 PF4P02776 101 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 NCK1P16333 377 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 VDAC2P45880 294 aaPredicted RBP14.92□□□□□ -0.02
TPM1-226ENST00000560959 RAB13P51153 203 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 GLYATQ6IB77 296 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 KCTD8Q6ZWB6 473 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 THAP5Q7Z6K1 395 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 LHFPL4Q7Z7J7 247 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 DYNAPQ8N1N2 210 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 HPSE2Q8WWQ2 592 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 ITFG2Q969R8 447 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 HIST1H2AAQ96QV6 131 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 GPR61Q9BZJ8 451 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 NMNAT2Q9BZQ4 307 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 FGF23Q9GZV9 251 aaPredicted RBP14.92□□□□□ -0.02
TPM1-226ENST00000560959 TSSC4Q9Y5U2 329 aaPredicted RBP14.92□□□□□ -0.02
TPM1-226ENST00000560959 CDH10Q9Y6N8 788 aa14.92□□□□□ -0.02
TPM1-226ENST00000560959 H3BUI4 141 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 MTRF1O75570 445 aaKnown RBP14.91□□□□□ -0.02
TPM1-226ENST00000560959 ACKR3P25106 362 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 BLCAPP62952 87 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 ARSJQ5FYB0 599 aaPredicted RBP14.91□□□□□ -0.02
TPM1-226ENST00000560959 HACD2Q6Y1H2 254 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 ZDHHC23Q8IYP9 409 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 ZNF561Q8N587 486 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 PIGCQ92535 297 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 PGAM5Q96HS1 289 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 OR5M11Q96RB7 305 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 OR51I2Q9H344 312 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 MUC13Q9H3R2 512 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 EFCAB1Q9HAE3 211 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 ABCD2Q9UBJ2 740 aa14.91□□□□□ -0.02
TPM1-226ENST00000560959 SYNGR1O43759 233 aa14.9□□□□□ -0.02
TPM1-226ENST00000560959 SEMG1P04279 462 aa14.9□□□□□ -0.02
TPM1-226ENST00000560959 NHLRC4P0CG21 123 aaPredicted RBP14.9□□□□□ -0.02
TPM1-226ENST00000560959 COX7A1P24310 79 aa14.9□□□□□ -0.02
TPM1-226ENST00000560959 OPRL1P41146 370 aa14.9□□□□□ -0.02
TPM1-226ENST00000560959 CAPZA1P52907 286 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms