RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 GABRG2P18507 467 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PGCP20142 388 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MAOAP21397 527 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CCL1P22362 96 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PAX6P26367 422 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CD34P28906 385 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CRABP1P29762 137 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 BDKRB2P30411 391 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RORAP35398 523 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RFC3P40938 356 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RPS27P42677 84 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 CX3CR1P49238 355 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ARRB1P49407 418 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF84P51523 738 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CCR4P51679 360 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CCR5P51681 352 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 LUMP51884 338 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 PGDP52209 483 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 POLR2HP52434 150 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 RIDAP52758 137 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 EFNA3P52797 238 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ATP1B3P54709 279 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SUMO3P55854 103 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 SLC26A5P58743 744 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TAS2R31P59538 309 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 B2MP61769 119 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 DCAF7P61962 342 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 BTG2P78543 158 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OC90Q02509 493 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 GLO1Q04760 184 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SCRN3Q0VDG4 424 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZP4Q12836 540 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SRSF5Q13243 272 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 UNC119Q13432 240 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 GPM6BQ13491 265 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PPP1R1AQ13522 171 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SNTB1Q13884 538 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 FZD2Q14332 565 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 KCNAB1Q14722 419 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ACKR1Q16570 336 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MICBQ29980 383 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 C2orf76Q3KRA6 126 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF528Q3MIS6 628 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ODF3L2Q3SX64 289 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MOGAT2Q3SYC2 334 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ACTBL2Q562R1 376 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PAN3Q58A45 887 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 RNASE10Q5GAN6 216 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 FAM74A1Q5RGS3 127 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 VAX1Q5SQQ9 334 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PDSS1Q5T2R2 415 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMEM244Q5VVB8 128 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SHEQ5VZ18 495 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ELP2Q6IA86 826 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 KCTD18Q6PI47 426 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 C11orf88Q6PI97 169 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 DNM1P34Q6PK57 102 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CORO6Q6QEF8 472 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PARM1Q6UWI2 310 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 IL34Q6ZMJ4 242 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF704Q6ZNC4 412 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 C17orf107Q6ZR85 190 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ACOT7LQ6ZUV0 252 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PGAP1Q75T13 922 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RAB11FIP2Q7L804 512 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF546Q86UE3 836 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 HOGA1Q86XE5 327 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF584Q8IVC4 421 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SFTPA2Q8IWL1 248 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 C9orf40Q8IXQ3 194 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 LINC00518Q8N0U6 118 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PUSL1Q8N0Z8 303 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 SVBPQ8N300 66 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 BPIFB2Q8N4F0 458 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 GATSQ8NAP1 163 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RELL2Q8NC24 303 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 ADPRHL1Q8NDY3 354 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 C7orf57Q8NEG2 295 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMEM185AQ8NFB2 350 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 BPIFCQ8NFQ6 507 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 DMBX1Q8NFW5 382 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR4D6Q8NGJ1 314 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR51A2Q8NGJ7 313 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR10S1Q8NGN2 331 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR4A4PQ8NGN8 299 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR1S2Q8NGQ3 325 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR13C3Q8NGS6 347 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR8K3Q8NH51 312 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF721Q8TF20 911 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SSC4DQ8WTU2 575 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 PTPMT1Q8WUK0 201 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 PPP1R1CQ8WVI7 109 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RNF133Q8WVZ7 376 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 METTL21AQ8WXB1 218 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 FGF14Q92915 247 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 BADQ92934 168 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ARL11Q969Q4 196 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 FAM46BQ96A09 425 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ADIPOR1Q96A54 375 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MVB12AQ96EY5 273 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms