RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CSAG2Q9Y5P2 127 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 RER1O15258 196 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 JTBO76095 146 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 PI3P19957 117 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 ZBTB25P24278 435 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 HMGCLL1Q8TB92 370 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 PELI1Q96FA3 418 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 SERPINE3A8MV23 424 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 CDX4O14627 284 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-208ENST00000560371 OSGIN2Q9Y236 505 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 CTRB1P17538 263 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 CTRB2Q6GPI1 263 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 KDF1Q8NAX2 398 aaPredicted RBP12.05□□□□□ -0.48
TRAF3-208ENST00000560371 POM121L2Q96KW2 1035 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 ADIRFQ15847 76 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 STUMQ69YW2 141 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 FAHD1Q6P587 224 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 SH2D5Q6ZV89 423 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 GPX8Q8TED1 209 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 EID2BQ96D98 161 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 DOK1Q99704 481 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 DCAF16Q9NXF7 216 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
TRAF3-208ENST00000560371 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 CRXO43186 299 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 FUT3P21217 361 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 CD276Q5ZPR3 534 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 OR8B4Q96RC9 309 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 FGF20Q9NP95 211 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 TAAR3PQ9P1P4 343 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ARID2Q68CP9 1835 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 PKDREJQ9NTG1 2253 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 EPPINO95925 133 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 H2AFB1P0C5Y9 115 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 BMI1P35226 326 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 FMODQ06828 376 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 KCNRGQ8N5I3 272 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 CELF2-AS1Q8N7Q2 184 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 OR2T6Q8NHC8 308 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 YIPF5Q969M3 257 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 SLC35B4Q969S0 331 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ARHGDIGQ99819 225 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 TCRBV5S2A0A599 114 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 FXYD1O00168 92 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 SLC25A1P53007 311 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 PPP1CBP62140 327 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 OR10R2Q8NGX6 335 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 SLC7A6Q92536 515 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 RAB1CQ92928 201 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ERGIC1Q969X5 290 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 RPEQ96AT9 228 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 PLPPR2Q96GM1 343 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 MN1Q10571 1320 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 CASP3P42574 277 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 OR8U1Q8NH10 309 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 DUSP21Q9H596 190 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 NPAP1Q9NZP6 1156 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 GPX5O75715 221 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 EPHA2P29317 976 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 UCNP55089 124 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ZG16BQ96DA0 208 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 GLRX2Q9NS18 164 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 DNAJB12Q9NXW2 375 aaKnown RBP12.04□□□□□ -0.48
TRAF3-208ENST00000560371 DGCR2P98153 550 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 ZNF774Q6NX45 483 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 VN1R4Q7Z5H5 301 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 BAGE3Q86Y29 109 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 BAGE2Q86Y30 109 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 PXT1Q8NFP0 134 aa12.04□□□□□ -0.48
TRAF3-208ENST00000560371 AQP7P3A6NL99 342 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 LRP3O75074 770 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 ACTL6AO96019 429 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 STPG1Q5TH74 334 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 TM4SF19Q96DZ7 209 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 LYSMD2Q8IV50 215 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 HES4Q9HCC6 221 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 GTF3C1Q12789 2109 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 BPIFB3P59826 476 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 BTG1P62324 171 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 CLDN23Q96B33 292 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
TRAF3-208ENST00000560371 A0A0B4J203 849 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 FAM27D1Q5T7N8 215 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 RIMKLAQ8IXN7 391 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 DERL3Q96Q80 235 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 C20orf202A1L168 122 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 GOSR1O95249 250 aa12.03□□□□□ -0.48
TRAF3-208ENST00000560371 KISS1Q15726 138 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms