RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 KCNJ16Q9NPI9 418 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 GPR173Q9NS66 373 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 CGGBP1Q9UFW8 167 aaPredicted RBP9.65□□□□□ -0.86
USP3-218ENST00000560202 RHBDD3Q9Y3P4 386 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 RTTNQ86VV8 2226 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 COL6A6A6NMZ7 2263 aa9.65□□□□□ -0.87
USP3-218ENST00000560202 A0A0B4J203 849 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 LINC00862A6NCI5 91 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CD300LBA8K4G0 201 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 SLC17A2O00624 439 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 ALDOBP05062 364 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 HCKP08631 526 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 TUBG1P23258 451 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CD40P25942 277 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 TNFSF8P32971 234 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 RFX2P48378 723 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CLDN12P56749 244 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 DMRTC1Q5HYR2 192 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 C1orf100Q5SVJ3 147 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 FAM166AQ6J272 317 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 LAX1Q8IWV1 398 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CDH26Q8IXH8 852 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 C1orf174Q8IYL3 243 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CSNK2A3Q8NEV1 391 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 OR5H6Q8NGV6 325 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 TRMT10AQ8TBZ6 339 aaKnown RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 PIGCQ92535 297 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CMBLQ96DG6 245 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 NKX3-1Q99801 234 aaPredicted RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 MRI1Q9BV20 369 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 METTL17Q9H7H0 456 aaPredicted RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 LIN7BQ9HAP6 207 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 TUBG2Q9NRH3 451 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 STEAP1Q9UHE8 339 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 AUP1Q9Y679 476 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 HPGDSO60760 199 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CST4P01036 141 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 NRASP01111 189 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CALCBP10092 127 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 PRF1P14222 555 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 RAC2P15153 192 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 PTAFRP25105 342 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 AZGP1P25311 298 aaKnown RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 HTR2CP28335 458 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 ZNF93P35789 620 aaPredicted RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 CNN3Q15417 329 aaKnown RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 RAB11BQ15907 218 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 OR2T2Q6IF00 324 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 TMEM108Q6UXF1 575 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 KRT74Q7RTS7 529 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 FTMTQ8N4E7 242 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 OR6M1Q8NGM8 313 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 UBASH3BQ8TF42 649 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 NPRL2Q8WTW4 380 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 PIGTQ969N2 578 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 SPSB1Q96BD6 273 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 HAVCR1Q96D42 359 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 MARS2Q96GW9 593 aaKnown RBP9.64□□□□□ -0.87
USP3-218ENST00000560202 SORCS2Q96PQ0 1159 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 UQCC2Q9BRT2 126 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 SRRQ9GZT4 340 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 CNTD2Q9H8S5 307 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 SPATA2Q9UM82 520 aa9.64□□□□□ -0.87
USP3-218ENST00000560202 EPG5Q9HCE0 2579 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 ZNF850A8MQ14 1090 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 ZG16O60844 167 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
USP3-218ENST00000560202 SORDQ00796 357 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 P2RY14Q15391 338 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 MZT2BQ6NZ67 158 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 MOB3CQ70IA8 216 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 RNF144BQ7Z419 303 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 SLC38A6Q8IZM9 456 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 SAMD12Q8N8I0 201 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 BHLHE23Q8NDY6 225 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 LGALS14Q8TCE9 139 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 SSC4DQ8WTU2 575 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 SNAPC3Q92966 411 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 HYLS1Q96M11 299 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 TECTBQ96PL2 329 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 SPACA5Q96QH8 159 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 PAPOLGQ9BWT3 736 aaKnown RBP9.63□□□□□ -0.87
USP3-218ENST00000560202 NGBQ9NPG2 151 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 CRIM1Q9NZV1 1036 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 OR5V1Q9UGF6 321 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 NDRG3Q9UGV2 375 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 V9GYH0 126 aa9.63□□□□□ -0.87
USP3-218ENST00000560202 MYO7BQ6PIF6 2116 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 DPRXA6NFQ7 191 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 ANKRD30BLA7E2S9 258 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 ATP6V1G2-DDX39BF2Z307 99 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 LILRA1O75019 489 aa9.62□□□□□ -0.87
USP3-218ENST00000560202 TSPAN9O75954 239 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms