RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SF3B6Q9Y3B4 125 aaKnown RBP5.61□□□□□ -1.51
CHRNA3-204ENST00000559002 IGHV3-64DA0A0J9YX35 117 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 A0A1B0GWJ7 208 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 A6NLC8 198 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 TMEM210A6NLX4 147 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 ZNF732B4DXR9 585 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 OVOL3O00110 214 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 AIREO43918 545 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 SC5DO75845 299 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 NCR1O76036 304 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 MAS1P04201 325 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 GRPP07492 148 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 CD55P08174 381 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 UCHL1P09936 223 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 GALP22466 123 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 GADD45AP24522 165 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 AZGP1P25311 298 aaKnown RBP5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 CALRP27797 417 aaKnown RBP5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 BDKRB2P30411 391 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 CRYBB2P43320 205 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 RBP2P50120 134 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 EFNA4P52798 201 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 ATP5J2P56134 94 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 MTCP1P56278 107 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 GNG3P63215 75 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 UBE2V2Q15819 145 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 DMRTC1Q5HYR2 192 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 FAM27D1Q5T7N8 215 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 DDI2Q5TDH0 399 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 PRAMEF6Q5VXH4 476 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 C22orf42Q6IC83 251 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 CD200R1LQ6Q8B3 271 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 UNQ9370/PRO34162Q6UXP9 181 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 TMEM91Q6ZNR0 172 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 GDPGP1Q6ZNW5 385 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 LHFPL2Q6ZUX7 228 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 KRT74Q7RTS7 529 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 CDH24Q86UP0 819 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 MOGAT3Q86VF5 341 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 ZNF573Q86YE8 665 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 CELF2-AS1Q8N7Q2 184 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 DNAAF1Q8NEP3 725 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 OR5A2Q8NGI9 324 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 OR11L1Q8NGX0 322 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 ITLN1Q8WWA0 313 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 HPSE2Q8WWQ2 592 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 HPS1Q92902 700 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 YIPF6Q96EC8 236 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 PERPQ96FX8 193 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 KCTD7Q96MP8 289 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 GPER1Q99527 375 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 FUNDC2Q9BWH2 189 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 OR51E2Q9H255 320 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 PPP1R3EQ9H7J1 279 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 FN3KRPQ9HA64 309 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 BARX1Q9HBU1 254 aaPredicted RBP5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 TMEM138Q9NPI0 162 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 SNTG1Q9NSN8 517 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 UFSP2Q9NUQ7 469 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 BEX4Q9NWD9 120 aaPredicted RBP5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 TXNL4BQ9NX01 149 aaKnown RBP5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 FOXJ3Q9UPW0 622 aa5.6□□□□□ -1.51
CHRNA3-204ENST00000559002 TRAV8-7A0A075B6U6 113 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 IGKV1-9A0A0C4DH69 117 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 IGHV1-69-2A0A0G2JMI3 117 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 hCG_1807616A0A1W2PRN6 198 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PQLC2LA1A4F0 135 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 LRP5LA4QPB2 252 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 MEGF11A6BM72 1044 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 CCDC160A6NGH7 325 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 LRRC30A6NM36 301 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 IFNL4K9M1U5 179 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PDCD5O14737 125 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PIN1P1O15428 100 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 CDC14BO60729 498 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 GPX5O75715 221 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 ALX3O95076 343 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 CYB5AP00167 134 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PLATP00750 562 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 HPXP02790 462 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 IRF2P14316 349 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 DAOP14920 347 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 IGFBP3P17936 291 aaPredicted RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 SRMP19623 302 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 FGF9P31371 208 aaPredicted RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 THBS2P35442 1172 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 GATA4P43694 442 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 HAAOP46952 286 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 PTH2RP49190 550 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 POU3F4P49335 361 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 LSM3P62310 102 aaKnown RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 MAB21L1Q13394 359 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 CARTPTQ16568 116 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 HFEQ30201 348 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 DEFB113Q30KQ7 82 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 GPR107Q5VW38 600 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 GLT8D1Q68CQ7 371 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 ASPHD2Q6ICH7 369 aa5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 HAGHLQ6PII5 290 aaPredicted RBP5.59□□□□□ -1.51
CHRNA3-204ENST00000559002 SATL1Q86VE3 508 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms