RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TSSK1BQ9BXA7 367 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ERVK-6Q9BXR3 956 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 KAT8Q9H7Z6 458 aaKnown RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 PIPOXQ9P0Z9 390 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 CTSZQ9UBR2 303 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 SNX24Q9Y343 169 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 HEY1Q9Y5J3 304 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 INSIG2Q9Y5U4 225 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 A0A0G2JN53 185 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 A0A1B0GW55 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 SH3PXD2BA1X283 911 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 SNTNA6NMZ2 147 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 AKR7A2O43488 359 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 UGT2B11O75310 529 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 UPK3AO75631 287 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 LY6G6CO95867 125 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4L2P0CJ85 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4L3P0CJ86 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4L5P0CJ88 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4L6P0CJ89 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4L7P0CJ90 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 GPX3P22352 226 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 ACKR3P25106 362 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 IMPA1P29218 277 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 TBPL1P62380 186 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 SLC35A2P78381 396 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DR1Q01658 176 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 LIPEQ05469 1076 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 SYPL1Q16563 259 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 TMEM44Q2T9K0 475 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 LRRC37A5PQ49AS3 106 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 ZNF774Q6NX45 483 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 C8orf74Q6P047 294 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 CCDC137Q6PK04 289 aaKnown RBP4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4L9Q6RFH8 374 aaPredicted RBP4.38□□□□□ -1.71
RTF1-204ENST00000558117 BRD3OSQ6XYD6 125 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 C17orf64Q86WR6 236 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 SBSPONQ8IVN8 264 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 ACTL9Q8TC94 416 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 MCUR1Q96AQ8 359 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 ITCHQ96J02 903 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 RNF157Q96PX1 679 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 CHID1Q9BWS9 393 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 SPNS1Q9H2V7 528 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 AUNIPQ9H7T9 357 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 VIPAS39Q9H9C1 493 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 TMEM165Q9HC07 324 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DYNLRB1Q9NP97 96 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 PAQR5Q9NXK6 330 aaPredicted RBP4.38□□□□□ -1.71
RTF1-204ENST00000558117 DUX4Q9UBX2 424 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 LCMT1Q9UIC8 334 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 PIGLQ9Y2B2 252 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 N6AMT1Q9Y5N5 214 aa4.38□□□□□ -1.71
RTF1-204ENST00000558117 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 BTBD17A6NE02 478 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 H3BTX0 84 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 DYNC1I1O14576 645 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 RNF13O43567 381 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 KRT6AP02538 564 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 SERPINA6P08185 405 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 UBTFL6P0CB48 400 aaPredicted RBP4.37□□□□□ -1.71
RTF1-204ENST00000558117 PPIAL4GP0DN37 164 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 TSPAN8P19075 237 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 GLRA1P23415 457 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 GPR183P32249 361 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 EFNB2P52799 333 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 CLDN8P56748 225 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 TFDP2Q14188 446 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 KCNJ11Q14654 390 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 ZNF146Q15072 292 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 PDK2Q15119 407 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 GABRA6Q16445 453 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 MS4A18Q3C1V0 323 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 CTSL3PQ5NE16 218 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 ZNF841Q6ZN19 808 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 DPY19L2P2Q6ZN68 376 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 NDUFA11Q86Y39 141 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 C1orf174Q8IYL3 243 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 CCDC197Q8NCU1 140 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 NPRL2Q8WTW4 380 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 RNF138Q8WVD3 245 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 TSEN15Q8WW01 171 aaKnown RBP4.37□□□□□ -1.71
RTF1-204ENST00000558117 MAIP1Q8WWC4 291 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 LIPHQ8WWY8 451 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 UPRTQ96BW1 309 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 HAVCR1Q96D42 359 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 PANX1Q96RD7 426 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 PAPOLGQ9BWT3 736 aaKnown RBP4.37□□□□□ -1.71
RTF1-204ENST00000558117 MRPL37Q9BZE1 423 aaKnown RBP4.37□□□□□ -1.71
RTF1-204ENST00000558117 PCBD2Q9H0N5 130 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 IL1RAPQ9NPH3 570 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 UFSP2Q9NUQ7 469 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 ZNF319Q9P2F9 582 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 PEF1Q9UBV8 284 aaKnown RBP4.37□□□□□ -1.71
RTF1-204ENST00000558117 EMCNQ9ULC0 261 aa4.37□□□□□ -1.71
RTF1-204ENST00000558117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.37□□□□□ -1.71
RTF1-204ENST00000558117 GSTK1Q9Y2Q3 226 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms