RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 VSTM5A8MXK1 200 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 DHHO43323 396 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 IGHG1P01857 330 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 PGA4P0DJD7 388 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 PGA3P0DJD8 388 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 SLC2A2P11168 524 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-230ENST00000557427 NR2C1P13056 603 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 SPNP16150 400 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 ATF1P18846 271 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 THBS4P35443 961 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 RPS27P42677 84 aaKnown RBP10.66□□□□□ -0.7
SHMT2-230ENST00000557427 FMODQ06828 376 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 IL18Q14116 193 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 P2RY14Q15391 338 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 GSG1Q2KHT4 349 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 C3orf36Q3SXR2 165 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 WDR38Q5JTN6 314 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 SLC25A47Q6Q0C1 308 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 LRRN1Q6UXK5 716 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 BAIAP2L2Q6UXY1 529 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 PRSS35Q8N3Z0 413 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF676Q8N7Q3 588 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 SAMD12Q8N8I0 201 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 ZDHHC22Q8N966 263 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 FGFBP3Q8TAT2 258 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 GPR148Q8TDV2 347 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 ST7LQ8TDW4 575 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 MCHR2Q969V1 340 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 VRK1Q99986 396 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-230ENST00000557427 RNF121Q9H920 327 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 MOV10Q9HCE1 1003 aaKnown RBP10.66□□□□□ -0.7
SHMT2-230ENST00000557427 CA10Q9NS85 328 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 SPATA2Q9UM82 520 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 IGHV2OR16-5A0A0B4J2B6 119 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 SRSF10O75494 262 aaKnown RBP10.65□□□□□ -0.7
SHMT2-230ENST00000557427 ALX3O95076 343 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 EIF4EP06730 217 aaKnown RBP10.65□□□□□ -0.7
SHMT2-230ENST00000557427 HNRNPCP07910 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHMT2-230ENST00000557427 ZFP36P26651 326 aaKnown RBP10.65□□□□□ -0.7
SHMT2-230ENST00000557427 LAP3P28838 519 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 DCTDP32321 178 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 ADIPOQQ15848 244 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 KCNMB1Q16558 191 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 HIST3H3Q16695 136 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 HACD4Q5VWC8 232 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 TRIQKQ629K1 86 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 CADM3Q8N126 398 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 Q8N402 240 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 SLC22A24Q8N4F4 322 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-230ENST00000557427 OR4M1Q8NGD0 313 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 CHAC2Q8WUX2 184 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 GFI1Q99684 422 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 NEURL2Q9BR09 285 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 TCF7L1Q9HCS4 588 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 AK6Q9Y3D8 172 aaKnown RBP10.65□□□□□ -0.7
SHMT2-230ENST00000557427 LRP12Q9Y561 859 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 R4GMQ9 66 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 V9GY05 133 aa10.65□□□□□ -0.7
SHMT2-230ENST00000557427 IFITM5A6NNB3 132 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 B9A039 149 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 AIPO00170 330 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 MPZL1O95297 269 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 FARS2O95363 451 aaKnown RBP10.64□□□□□ -0.71
SHMT2-230ENST00000557427 AVPP01185 164 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 HKR1P10072 659 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 CALCBP10092 127 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 EPHA1P21709 976 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 RFX2P48378 723 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 PITPNBP48739 271 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF84P51523 738 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF133P52736 654 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-230ENST00000557427 SCAND1P57086 179 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 SNRPD2P62316 118 aaKnown RBP10.64□□□□□ -0.71
SHMT2-230ENST00000557427 FOXL1Q12952 345 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 SGCAQ16586 387 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF627Q7L945 461 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 DCXRQ7Z4W1 244 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-230ENST00000557427 LRRTM1Q86UE6 522 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 LRRC18Q8N456 261 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 C19orf18Q8NEA5 215 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 OR5H6Q8NGV6 325 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 RNF133Q8WVZ7 376 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 C11orf40Q8WZ69 217 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 TMEM38BQ9NVV0 291 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF224Q9NZL3 707 aa10.64□□□□□ -0.71
SHMT2-230ENST00000557427 A0A0G2JMP0 313 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 A0A0X1KG70 313 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 PLA2G10O15496 165 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 UBL3O95164 117 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 PAHP00439 452 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms