RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 C1orf123Q9NWV4 160 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4Q9UBX2 424 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 NDUFAF1Q9Y375 327 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
SCFD1-223ENST00000557076 IGHV3OR15-7A0A075B7D8 119 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 IGLV1-36A0A0B4J1U3 117 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 ACOT8O14734 319 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 LDLRAD4O15165 306 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 SLC25A17O43808 307 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 AHCYL1O43865 530 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 SERPINB7O75635 380 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 LYPD3O95274 346 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 IL6P05231 212 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 ACAA1P09110 424 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 FRMD6-AS1P0C7T7 363 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 DUX4L4P0CJ87 422 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 UMPSP11172 480 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 CA6P23280 308 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 POU1F1P28069 291 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 IL12AP29459 219 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 ALDH3A1P30838 453 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 GRK5P34947 590 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 CEBPDP49716 269 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 INSL3P51460 131 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 RPL27P61353 136 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 UFM1P61960 85 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 LSM6P62312 80 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 RPL23AP62750 156 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 ECH1Q13011 328 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 FADDQ13158 208 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 AQP6Q13520 282 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 PCLAFQ15004 111 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 CCDC92Q53HC0 331 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 C10orf25Q5T742 122 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 REEP3Q6NUK4 255 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 C10orf99Q6UWK7 81 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF826PQ6ZT77 177 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 PGAP1Q75T13 922 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 C16orf82Q7Z2V1 217 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 NANOGNBQ7Z5D8 188 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 DYNAPQ8N1N2 210 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 FAM216BQ8N7L0 139 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 GJC3Q8NFK1 279 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 AGR3Q8TD06 166 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 AENQ8WTP8 325 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 SPRYD4Q8WW59 207 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 H1FXQ92522 213 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 MAL2Q969L2 176 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 FYTTD1Q96QD9 318 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 MCHR1Q99705 422 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 ZNF649Q9BS31 505 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 RAD21L1Q9H4I0 556 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 WDR55Q9H6Y2 383 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 MEPEQ9NQ76 525 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 MRPL15Q9P015 296 aaKnown RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 PSMC3IPQ9P2W1 217 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 SLC25A10Q9UBX3 287 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-223ENST00000557076 SLC13A4Q9UKG4 626 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 LYVE1Q9Y5Y7 322 aa3.7□□□□□ -1.82
SCFD1-223ENST00000557076 HERC1Q15751 4861 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 hCG_1809904A0A1W2PP81 198 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 A0A1W2PPE2 198 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 A0A1W2PQ09 198 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 A0A1W2PR64 198 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 hCG_1807616A0A1W2PRN6 198 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 A0A1W2PRV1 198 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 TRAPPC13A5PLN9 417 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 HTR3EA5X5Y0 456 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 A6NIZ1 184 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 AQP12BA6NM10 295 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 CD300LBA8K4G0 201 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 C5orf58C9J3I9 102 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 CCL24O00175 119 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 CLIC1O00299 241 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 COPEO14579 308 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 RER1O15258 196 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 OR7A10O76100 309 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 MT-ND1P03886 318 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 VIMP08670 466 aaKnown RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 LBPP18428 481 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 GGT2P36268 569 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 NAA10P41227 235 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 LUMP51884 338 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 SLC25A1P53007 311 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 RGS8P57771 180 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 RAP1BP61224 184 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 RAP1AP62834 184 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 HIST1H3AP68431 136 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 ELF3P78545 371 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-223ENST00000557076 SELPLGQ14242 412 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 KRT72Q14CN4 511 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 SSX2Q16385 188 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 PCK2Q16822 640 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 KRTAP27-1Q3LI81 207 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 PLA1AQ53H76 456 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 ENTPD8Q5MY95 495 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
SCFD1-223ENST00000557076 HIST2H3PS2Q5TEC6 136 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms