RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PPP1CBP62140 327 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 FAM3AP98173 230 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 MXD1Q05195 221 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 SNTB2Q13425 540 aaKnown RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 GK2Q14410 553 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 CTF1Q16619 201 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 DEFB113Q30KQ7 82 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 CCDC58Q4VC31 144 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ZMAT1Q5H9K5 638 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 NCMAPQ5T1S8 102 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 OR2T2Q6IF00 324 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ADAM5Q6NVV9 412 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 UNQ9370/PRO34162Q6UXP9 181 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 COLCA1Q6ZS62 124 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 RHOUQ7L0Q8 258 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 DPPA2Q7Z7J5 298 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 P2RY8Q86VZ1 359 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ANKRD13BQ86YJ7 626 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 CCDC36Q8IYA8 594 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 OR5AS1Q8N127 324 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 DNAAF1Q8NEP3 725 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 WFDC11Q8NEX6 87 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 OR13C3Q8NGS6 347 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 LILRB1Q8NHL6 650 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 TSEN15Q8WW01 171 aaKnown RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 APOBEC3DQ96AK3 386 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 FGGYQ96C11 551 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 C12orf43Q96C57 262 aaKnown RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 CMBLQ96DG6 245 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ADAT3Q96EY9 351 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 PIK3IP1Q96FE7 263 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 GFI1Q99684 422 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 SLC30A2Q9BRI3 323 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 FGF23Q9GZV9 251 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 COMMD4Q9H0A8 199 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 OR10A2Q9H208 303 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 OR10A4Q9H209 315 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 MOB1AQ9H8S9 216 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 OBP2BQ9NPH6 170 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 GPR173Q9NS66 373 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 MYEF2Q9P2K5 600 aaKnown RBP4.53□□□□□ -1.68
ATXN3-244ENST00000556898 V9GYS6 101 aa4.53□□□□□ -1.68
ATXN3-244ENST00000556898 ABCA4P78363 2273 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 TRBV5-7A0A0A0MS05 114 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 IGKV1-9A0A0C4DH69 117 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 IGHV3-64DA0A0J9YX35 117 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 A0A1W2PPW3 197 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 TMEM212A6NML5 194 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 SHISA9B4DS77 424 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 E7EQL1 145 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 H0YL77 283 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 H3BMQ9 156 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 GABARAPO95166 117 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 CDRT1O95170 752 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 MPIG6BO95866 241 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 LY6G6DO95868 133 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 APOC1P02654 83 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 RAF1P04049 648 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 MAS1P04201 325 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 ISG15P05161 165 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 CD1AP06126 327 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 OCM2P0CE71 109 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 UBCP0CG48 685 aaKnown RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 PPP3CBP16298 524 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 ADRA2CP18825 462 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 PSMA1P25786 263 aaKnown RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 CALRP27797 417 aaKnown RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 PCSK6P29122 969 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 KIR2DL3P43628 341 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 OR10A3P58181 314 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 NKX6-1P78426 367 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 SORDQ00796 357 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 PSG7Q13046 419 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 MRPL28Q13084 256 aaKnown RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 GPR50Q13585 617 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 Q499Y3 187 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 SPRNQ5BIV9 151 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 YIF1BQ5BJH7 314 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 TMEM244Q5VVB8 128 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF544Q6NX49 715 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 CD200R1LQ6Q8B3 271 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 METAP1DQ6UB28 335 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF704Q6ZNC4 412 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 MOB3CQ70IA8 216 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 DOK3Q7L591 496 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 LRRTM1Q86UE6 522 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 BHLHE23Q8NDY6 225 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 OR56B2PQ8NGI1 322 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 OR51A2Q8NGJ7 313 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 OR13C9Q8NGT0 318 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 GPR148Q8TDV2 347 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 NPRL2Q8WTW4 380 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 PIGCQ92535 297 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 PIGTQ969N2 578 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 SPSB4Q96A44 273 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 ISOC1Q96CN7 298 aa4.52□□□□□ -1.69
ATXN3-244ENST00000556898 MARS2Q96GW9 593 aaKnown RBP4.52□□□□□ -1.69
ATXN3-244ENST00000556898 DERL3Q96Q80 235 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms