RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 ZNF485Q8NCK3 441 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 OR4K5Q8NGD3 323 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 SYNPRQ8TBG9 265 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 ZFAND1Q8TCF1 268 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 C15orf40Q8WUR7 153 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 DNAJA4Q8WW22 397 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 OIT3Q8WWZ8 545 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 ACOT11Q8WXI4 607 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 CIDECQ96AQ7 238 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 LRR1Q96L50 414 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 AMDHD1Q96NU7 426 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 DCTN5Q9BTE1 182 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 TMEM43Q9BTV4 400 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 BARHL1Q9BZE3 327 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 LAT2Q9GZY6 243 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 RANBP3Q9H6Z4 567 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 PPP1R3EQ9H7J1 279 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 MTHFD2LQ9H903 347 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 ABCB9Q9NP78 766 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 POLE4Q9NR33 117 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 POLE3Q9NRF9 147 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 SNTG1Q9NSN8 517 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 SERTAD4Q9NUC0 356 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 TMEM106BQ9NUM4 274 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 ERVK13-1Q9NX77 482 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 HAO2Q9NYQ3 351 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 NKIRAS2Q9NYR9 191 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 TVP23BQ9NYZ1 205 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 DNAJB11Q9UBS4 358 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 AASSQ9UDR5 926 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 MRTO4Q9UKD2 239 aaKnown RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 TMEM5Q9Y2B1 443 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 SPIN1Q9Y657 262 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-242ENST00000556644 HSPG2P98160 4391 aa3.46□□□□□ -1.86
ATXN3-242ENST00000556644 A0A087WUU8 490 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TRAV1-2A0A0B4J238 106 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 A0A1B0GVI7 797 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 FAM240BA0A1B0GVZ2 78 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ANKRD34BA5PLL1 514 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 NAP1L6A6NFF2 107 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 AQP7P3A6NL99 342 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PRR23D1E9PI22 279 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 J3QRE1 110 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 P2RY10O00398 339 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 AP3D1O14617 1153 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CTDSPLO15194 276 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 LYRM1O43325 122 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CHST1O43916 411 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PLOD3O60568 738 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 GATBO75879 557 aaKnown RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 LY86O95711 162 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 MT-ND5P03915 603 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 FBP1P09467 338 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 WNT2P09544 360 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 FRMD6-AS1P0C7T7 363 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 LIMS3P0CW19 117 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 LIMS4P0CW20 117 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 RBMY1A1P0DJD3 496 aaKnown RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PRR23D2P0DMB1 279 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CCL2P13500 99 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 MMP9P14780 707 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 SPNP16150 400 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TNFRSF1BP20333 461 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PAICSP22234 425 aaKnown RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PAX6P26367 422 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TGFBR1P36897 503 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 OMPP47874 163 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 INPP1P49441 399 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 VEGFCP49767 419 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ETV1P50549 477 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 P2RX1P51575 399 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 DLX1P56177 255 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TAS2R41P59536 307 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 SELENOVP59797 346 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ARPC4P59998 168 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 RRAS2P62070 204 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ACTC1P68032 377 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ACTA1P68133 377 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CD300CQ08708 224 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 MRPL28Q13084 256 aaKnown RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 SLC17A1Q14916 467 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 BAK1Q16611 211 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 LIPKQ5VXJ0 399 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PYHIN1Q6K0P9 492 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 NIPAL3Q6P499 406 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TNFAIP8L2Q6P589 184 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 GPAT4Q86UL3 456 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 LAX1Q8IWV1 398 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 Q8N402 240 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PNKDQ8N490 385 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PAQR4Q8N4S7 273 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ACBD7Q8N6N7 88 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CELF2-AS1Q8N7Q2 184 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 OR2T33Q8NG76 320 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 OR9K2Q8NGE7 335 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 OR5AK3PQ8NH89 298 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 VANGL1Q8TAA9 524 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 XAGE5Q8WWM1 108 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TMEM45BQ96B21 275 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 RNFT2Q96EX2 444 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms