RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FAM71F1Q96KD3 344 aaPredicted RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 C1orf147Q96MC9 270 aaPredicted RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 RAB3IPQ96QF0 476 aaPredicted RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 CIB1Q99828 191 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 RBM4BQ9BQ04 359 aaKnown RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 CNTD2Q9H8S5 307 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 RASL12Q9NYN1 266 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 ENPP5Q9UJA9 477 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 COPS3Q9UNS2 423 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 ANK2Q01484 3957 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 TENM1Q9UKZ4 2725 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 A0A1B0GVI7 797 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 LOC110117498-PIK3R3F6TDL0 507 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 DLGAP1O14490 977 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 FCN3O75636 299 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 TTRP02766 147 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 OR2T7P0C7T2 308 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 HTR1FP30939 366 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 CAV3P56539 151 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 CXCR4P61073 352 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 HOXA4Q00056 320 aaPredicted RBP9.79□□□□□ -0.84
VRK1-204ENST00000555351 CDONQ4KMG0 1287 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 LRRC10Q5BKY1 277 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 TMEM42Q69YG0 159 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 ZNF788Q6ZQV5 615 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 ELMOD2Q8IZ81 293 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 CCDC54Q8NEL0 328 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 OR2T27Q8NH04 317 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 ANGPTL6Q8NI99 470 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 ZNF671Q8TAW3 534 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 OR51E1Q8TCB6 317 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 NPRL2Q8WTW4 380 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 TRUB1Q8WWH5 349 aaKnown RBP9.79□□□□□ -0.84
VRK1-204ENST00000555351 GATAD2BQ8WXI9 593 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 RPL3LQ92901 407 aaKnown RBP9.79□□□□□ -0.84
VRK1-204ENST00000555351 TBX15Q96SF7 602 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 CCL13Q99616 98 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 OR51I2Q9H344 312 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 PPP1R3EQ9H7J1 279 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 GPR84Q9NQS5 396 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 DNAJB11Q9UBS4 358 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 IKZF2Q9UKS7 526 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 OAZ3Q9UMX2 235 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 SNX5Q9Y5X3 404 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 POMT1Q9Y6A1 747 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 R4GMQ9 66 aa9.79□□□□□ -0.84
VRK1-204ENST00000555351 IGHV3OR15-7A0A075B7D8 119 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 CENPVL3A0A0U1RRI6 287 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 NKX6-3A6NJ46 265 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 PRR32B1ATL7 298 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 PSMD9O00233 223 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 SULT1C4O75897 302 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 ACAA1P09110 424 aaPredicted RBP9.78□□□□□ -0.84
VRK1-204ENST00000555351 GPM6AP51674 278 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 CDC42P60953 191 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 RPL15P61313 204 aaKnown RBP9.78□□□□□ -0.84
VRK1-204ENST00000555351 IL13RA1P78552 427 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 SLC9A3R2Q15599 337 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 AWAT1Q58HT5 328 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 SLC25A30Q5SVS4 291 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 BCL2L15Q5TBC7 163 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 ZFP1Q6P2D0 407 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 Q6YL49 198 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 KCTD8Q6ZWB6 473 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 COMMD2Q86X83 199 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 CMTM4Q8IZR5 234 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 SGMS2Q8NHU3 365 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 ST8SIA4Q92187 359 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 AQP3Q92482 292 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 IL4I1Q96RQ9 567 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 PCGF1Q9BSM1 259 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 DCTN5Q9BTE1 182 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 FGF23Q9GZV9 251 aaPredicted RBP9.78□□□□□ -0.84
VRK1-204ENST00000555351 RASSF4Q9H2L5 321 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 USE1Q9NZ43 259 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 OR52A1Q9UKL2 312 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 V9GYS6 101 aa9.78□□□□□ -0.84
VRK1-204ENST00000555351 IGHV1-69DA0A0B4J2H0 117 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 OR2AT4A6NND4 320 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 ZNF732B4DXR9 585 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 SIGLEC5O15389 551 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 NOS1APO75052 506 aaPredicted RBP9.77□□□□□ -0.85
VRK1-204ENST00000555351 NRASP01111 189 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 IGHV1-69P01742 117 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 KRT8P05787 483 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 SFTPBP07988 381 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 AMY2BP19961 511 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 CCL1P22362 96 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 GLRA1P23415 457 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 MFGE8Q08431 387 aaPredicted RBP9.77□□□□□ -0.85
VRK1-204ENST00000555351 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 CLVS2Q5SYC1 327 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 ZNF684Q5T5D7 378 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 C16orf87Q6PH81 154 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 BRD3OSQ6XYD6 125 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 BCDIN3DQ7Z5W3 292 aaKnown RBP9.77□□□□□ -0.85
VRK1-204ENST00000555351 ZNF573Q86YE8 665 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 EGFL6Q8IUX8 553 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms