RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MCRIP2Q9BUT9 160 aaKnown RBP7.2□□□□□ -1.26
PRKCH-208ENST00000553846 NDEL1Q9GZM8 345 aa7.2□□□□□ -1.26
PRKCH-208ENST00000553846 RABEP2Q9H5N1 569 aa7.2□□□□□ -1.26
PRKCH-208ENST00000553846 SP140LQ9H930 580 aa7.2□□□□□ -1.26
PRKCH-208ENST00000553846 USE1Q9NZ43 259 aa7.2□□□□□ -1.26
PRKCH-208ENST00000553846 COMMD3-BMI1R4GMX3 469 aa7.2□□□□□ -1.26
PRKCH-208ENST00000553846 TRBV4-1A0A0J9YWV2 114 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 TMEM210A6NLX4 147 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 RAMP3O60896 148 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 GLCEO94923 617 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 CLIC3O95833 236 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 RBP4P02753 201 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 LYL1P12980 280 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 ZNF823P16415 610 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 CENPAP49450 140 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 CEBPDP49716 269 aaPredicted RBP7.19□□□□□ -1.26
PRKCH-208ENST00000553846 PRKXP51817 358 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 RPL23AP62750 156 aaKnown RBP7.19□□□□□ -1.26
PRKCH-208ENST00000553846 RPL31P62899 125 aaKnown RBP7.19□□□□□ -1.26
PRKCH-208ENST00000553846 SMARCD3Q6STE5 483 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 C16orf82Q7Z2V1 217 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 OR2W3Q7Z3T1 314 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 DCXRQ7Z4W1 244 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 CD177Q8N6Q3 437 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 OR4X2Q8NGF9 303 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 OR52H1Q8NGJ2 320 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 OR4K13Q8NH42 304 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 REEP6Q96HR9 211 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 ERMAPQ96PL5 475 aaPredicted RBP7.19□□□□□ -1.26
PRKCH-208ENST00000553846 RCHY1Q96PM5 261 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 PRR25Q96S07 402 aa7.19□□□□□ -1.26
PRKCH-208ENST00000553846 PAPOLGQ9BWT3 736 aaKnown RBP7.19□□□□□ -1.26
PRKCH-208ENST00000553846 SORL1Q92673 2214 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 UNC119BA6NIH7 251 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 CST4P01036 141 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 ARG1P05089 322 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 LPLP06858 475 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 PGA5P0DJD9 388 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 IGHV1-8P0DP01 117 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 TROVE2P10155 538 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRKCH-208ENST00000553846 POU1F1P28069 291 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 PYCR1P32322 319 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 IFNA8P32881 189 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 LUMP51884 338 aaPredicted RBP7.18□□□□□ -1.26
PRKCH-208ENST00000553846 LGALS4P56470 323 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 PRDX4Q13162 271 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 COQ5Q5HYK3 327 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 THAP5Q7Z6K1 395 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 CENPVQ7Z7K6 275 aaPredicted RBP7.18□□□□□ -1.26
PRKCH-208ENST00000553846 CALHM1Q8IU99 346 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 SBSPONQ8IVN8 264 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 CSNK2A3Q8NEV1 391 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 Q8NFD4 153 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 SLAMF6Q96DU3 332 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 MICU1Q9BPX6 476 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 COPS4Q9BT78 406 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 RTL8AQ9BWD3 113 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 OR51I2Q9H344 312 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 OR52D1Q9H346 318 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 YY1AP1Q9H869 796 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 LIN7BQ9HAP6 207 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 ABCB10Q9NRK6 738 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 VNN3Q9NY84 501 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 NDUFAF4Q9P032 175 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 CD300AQ9UGN4 299 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 SCOCQ9UIL1 159 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 MPC1Q9Y5U8 109 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 ENPP4Q9Y6X5 453 aa7.18□□□□□ -1.26
PRKCH-208ENST00000553846 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 TVP23AA6NH52 213 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 ZNF878C9JN71 531 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 ZNF682O95780 498 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 RENP00797 406 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 GLRA1P23415 457 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 SLC6A1P30531 599 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 MYCNOSP40205 109 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 GABRA2P47869 451 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 CX3CR1P49238 355 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 MAGOHP61326 146 aaKnown RBP7.17□□□□□ -1.26
PRKCH-208ENST00000553846 CYLC2Q14093 348 aaPredicted RBP7.17□□□□□ -1.26
PRKCH-208ENST00000553846 IFI44LQ53G44 452 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 TEX30Q5JUR7 227 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 MINOS1Q5TGZ0 78 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 LCN8Q6JVE9 175 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 CBLL1Q75N03 491 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 KRT77Q7Z794 578 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 OR2T12Q8NG77 320 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 OR4M1Q8NGD0 313 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 OR4C15Q8NGM1 316 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 FANK1Q8TC84 345 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 AQP3Q92482 292 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 RNF166Q96A37 237 aaPredicted RBP7.17□□□□□ -1.26
PRKCH-208ENST00000553846 HSH2DQ96JZ2 352 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 C7orf34Q96L11 122 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 OR8B4Q96RC9 309 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 CITED4Q96RK1 184 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 SH3GL1Q99961 368 aa7.17□□□□□ -1.26
PRKCH-208ENST00000553846 EDA2RQ9HAV5 297 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms