RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-207ENST00000553837 SLC18B1Q6NT16 456 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 ADAD2Q8NCV1 583 aaKnown RBP10.83□□□□□ -0.68
SHMT2-207ENST00000553837 ASB17Q8WXJ9 295 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 ISOC2Q96AB3 205 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 OR6C1Q96RD1 312 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 CKLFQ9UBR5 152 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 WNT16Q9UBV4 365 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 VDAC3Q9Y277 283 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 LRP12Q9Y561 859 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 LOC101059948A0A1B0GTJ6 334 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 M0R036 132 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 SRSF10O75494 262 aaKnown RBP10.83□□□□□ -0.68
SHMT2-207ENST00000553837 SERPINA5P05154 406 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 EDN3P14138 238 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 ADH6P28332 368 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 SLC26A5P58743 744 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 CLN3Q13286 438 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 EIF2B1Q14232 305 aaKnown RBP10.83□□□□□ -0.68
SHMT2-207ENST00000553837 HYAL4Q2M3T9 481 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 AARDQ4LEZ3 155 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 GLYATL3Q5SZD4 288 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 PRR18Q8N4B5 295 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 FAM24BQ8N5W8 94 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 PLPP7Q8NBV4 271 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 CA5BP1Q8WTZ4 195 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 SECTM1Q8WVN6 248 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 MRGPRFQ96AM1 343 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 MISP3Q96FF7 219 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 SLC5A7Q9GZV3 580 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 AKIRIN1Q9H9L7 192 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-207ENST00000553837 ZMAT3Q9HA38 289 aaKnown RBP10.83□□□□□ -0.68
SHMT2-207ENST00000553837 FN3KRPQ9HA64 309 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 PARPBPQ9NWS1 579 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
SHMT2-207ENST00000553837 CACNA1EQ15878 2313 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 ANKUB1A6NFN9 424 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 LMX1BO60663 402 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CDX1P47902 265 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-207ENST00000553837 FOXK1P85037 733 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 FOXF1Q12946 379 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 ADGRE4PQ86SQ3 457 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 LINC00346Q8IVM7 164 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 ASB10Q8WXI3 467 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CLDN23Q96B33 292 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CHST5Q9GZS9 411 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 MED29Q9NX70 200 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 TRBV11-1A0A0K0K1C0 115 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 TMEM235A6NFC5 223 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 MSGN1A6NI15 193 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 GDF9O60383 454 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CSTBP04080 98 aaKnown RBP10.82□□□□□ -0.68
SHMT2-207ENST00000553837 IFNA6P05013 189 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 PET100P0DJ07 73 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 FOSL2P15408 326 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 MAS1LP35410 378 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CXCL12P48061 93 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 CCL7P80098 99 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 SQSTM1Q13501 440 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 RHEBQ15382 184 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 TGIF1Q15583 401 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 NSUN5P2Q63ZY6 315 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 TMEM225Q6GV28 225 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 RABEPKQ7Z6M1 372 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 FJX1Q86VR8 437 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 COMMD1Q8N668 190 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 SLC26A10Q8NG04 563 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 OR56B1Q8NGI3 324 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 ASB5Q8WWX0 329 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 PTX4Q96A99 478 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 IP6K3Q96PC2 410 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 RAB18Q9NP72 206 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 DHDHQ9UQ10 334 aa10.82□□□□□ -0.68
SHMT2-207ENST00000553837 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 MKRN2OSH3BPM6 223 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 OPN1LWP04000 364 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 CD37P11049 281 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 ZNF385CQ66K41 422 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-207ENST00000553837 HIST2H3AQ71DI3 136 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 TRAPPC6BQ86SZ2 158 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 OR51A2Q8NGJ7 313 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 OR1J1Q8NGS3 322 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 OR52N5Q8NH56 324 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 LYPD6BQ8NI32 183 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 AQP3Q92482 292 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 R3HDM4Q96D70 268 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 MARS2Q96GW9 593 aaKnown RBP10.81□□□□□ -0.68
SHMT2-207ENST00000553837 GAR1Q9NY12 217 aaKnown RBP10.81□□□□□ -0.68
SHMT2-207ENST00000553837 TAS2R4Q9NYW5 299 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 SRPK3Q9UPE1 567 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 WASF3Q9UPY6 502 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 KIF26BQ2KJY2 2108 aa10.81□□□□□ -0.68
SHMT2-207ENST00000553837 IGHV5-10-1A0A0J9YXX1 117 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 MEGF11A6BM72 1044 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 H3BML4 177 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 H7C1Q1 480 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 SCRG1O75711 98 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 CST4P01036 141 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms