RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CDK13Q14004 1512 aaKnown RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 KDM5CP41229 1560 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 LRP5O75197 1615 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 IGKV2D-30A0A075B6S6 120 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 IQCMA0A1B0GVH7 501 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 IGLON5A6NGN9 336 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 ERVV-2B6SEH9 535 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 ARPC5O15511 151 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 FRAT2O75474 233 aaPredicted RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 CNMDO75829 334 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 LALBAP00709 142 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 IGHV3-9P01782 118 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 CD1DP15813 335 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 AKR1C4P17516 323 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 DVL1P1P54792 670 aaPredicted RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 MFAP2P55001 183 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 RAB25P57735 213 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 SNRPD1P62314 119 aaKnown RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 ZNF45Q02386 682 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 ZNF92Q03936 586 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 PUDPQ08623 228 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 CD300CQ08708 224 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 PPP1R1AQ13522 171 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 EDDM3AQ14507 147 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 KCNJ11Q14654 390 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 MLF2Q15773 248 aaPredicted RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 IZUMO4Q1ZYL8 232 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 FAM219BQ5XKK7 198 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 FAM71E1Q6IPT2 247 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 OLIG3Q7RTU3 272 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 SLC34A3Q8N130 599 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 FTMTQ8N4E7 242 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 TMEM161BQ8NDZ6 487 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 OR52E4Q8NGH9 312 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 OR51Q1Q8NH59 317 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 COQ8AQ8NI60 647 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 EEF1AKMT1Q8WVE0 214 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 FRAT1Q92837 279 aaPredicted RBP3.39□□□□□ -1.87
USP44-208ENST00000552440 DDIT4LQ96D03 193 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 SLC25A38Q96DW6 304 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 LIME1Q9H400 295 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 IL1RAPQ9NPH3 570 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 TREM2Q9NZC2 230 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 COMMD9Q9P000 198 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 POU2F3Q9UKI9 436 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 DIP2CQ9Y2E4 1556 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 MYO3AQ8NEV4 1616 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 SMCHD1A6NHR9 2005 aa3.39□□□□□ -1.87
USP44-208ENST00000552440 DEPDC5O75140 1603 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 LRP6O75581 1613 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 SYNMO15061 1565 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 MIF4GDA9UHW6 222 aaKnown RBP3.38□□□□□ -1.87
USP44-208ENST00000552440 ZNF878C9JN71 531 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TSTD3H0UI37 97 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 C15orf65H3BRN8 121 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 SUPT3HO75486 399 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 SCRG1O75711 98 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 VENTXO95231 258 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 SOX14O95416 240 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 SEMG1P04279 462 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TFPTP0C1Z6 253 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 PGA4P0DJD7 388 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 PGA3P0DJD8 388 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 PGA5P0DJD9 388 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 WARSP23381 471 aaKnown RBP3.38□□□□□ -1.87
USP44-208ENST00000552440 OPRL1P41146 370 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 CDKN2DP55273 166 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TAS2R41P59536 307 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 FMODQ06828 376 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TWF1Q12792 350 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 APOFQ13790 326 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TMEM30BQ3MIR4 351 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TMEM97Q5BJF2 176 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TFDP3Q5H9I0 405 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 OR2T5Q6IEZ7 315 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 Q6ZVH6 145 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 FAM231DQ6ZW35 169 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 P2RY8Q86VZ1 359 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 RAB43Q86YS6 212 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 GAPTQ8N292 157 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 ZNF441Q8N8Z8 693 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 OR10K1Q8NGX5 313 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 OR2T29Q8NH02 315 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 ZFAND1Q8TCF1 268 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TMEM54Q969K7 222 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 AIF1LQ9BQI0 150 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TM2D1Q9BX74 207 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 YTHDF1Q9BYJ9 559 aaKnown RBP3.38□□□□□ -1.87
USP44-208ENST00000552440 ALX4Q9H161 411 aaPredicted RBP3.38□□□□□ -1.87
USP44-208ENST00000552440 TPK1Q9H3S4 243 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 WDR41Q9HAD4 459 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 B3GAT2Q9NPZ5 323 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 TMEM9BQ9NQ34 198 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 DDIT4Q9NX09 232 aa3.38□□□□□ -1.87
USP44-208ENST00000552440 RWDD2AQ9UIY3 292 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms