RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PCDHB10Q9UN67 800 aa14.55□□□□□ -0.08
CDK4-208ENST00000551706 CAB39Q9Y376 341 aaPredicted RBP14.55□□□□□ -0.08
CDK4-208ENST00000551706 EXOSC1Q9Y3B2 195 aaKnown RBP14.55□□□□□ -0.08
CDK4-208ENST00000551706 PPIAL4AQ9Y536 164 aa14.55□□□□□ -0.08
CDK4-208ENST00000551706 LOC107986453A0A1B0GWG9 222 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 hCG_1807616A0A1W2PRN6 198 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 NRASP01111 189 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 LIMS3P0CW19 117 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 LIMS4P0CW20 117 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 KIR3DL2P43630 455 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 GNG3P63215 75 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 ALKBH1Q13686 389 aaKnown RBP14.54□□□□□ -0.08
CDK4-208ENST00000551706 FAM76BQ5HYJ3 339 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 PLCXD3Q63HM9 321 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 TMEM42Q69YG0 159 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 KCTD8Q6ZWB6 473 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 WDR86Q86TI4 376 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 OR51F2Q8NH61 342 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 HPSE2Q8WWQ2 592 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 TLNRD1Q9H1K6 362 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 PPP1R3EQ9H7J1 279 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 ISG20L2Q9H9L3 353 aaKnown RBP14.54□□□□□ -0.08
CDK4-208ENST00000551706 DYSFO75923 2080 aa14.54□□□□□ -0.08
CDK4-208ENST00000551706 LMX1BO60663 402 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 MSMBP08118 114 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 CCDC159P0C7I6 412 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 PCMT1P22061 227 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 THBS2P35442 1172 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 CFHR2P36980 270 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 TGM4P49221 684 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 DVL1P1P54792 670 aaPredicted RBP14.53□□□□□ -0.08
CDK4-208ENST00000551706 NANOS3P60323 173 aaKnown RBP14.53□□□□□ -0.08
CDK4-208ENST00000551706 ST3GAL4Q11206 333 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 HNRNPA0Q13151 305 aaKnown RBP14.53□□□□□ -0.08
CDK4-208ENST00000551706 CEP78Q5JTW2 689 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 IZUMO2Q6UXV1 221 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 MOB3CQ70IA8 216 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 GGHQ92820 318 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 TECTBQ96PL2 329 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 PATZ1Q9HBE1 687 aaKnown RBP14.53□□□□□ -0.08
CDK4-208ENST00000551706 TMEM165Q9HC07 324 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 TMEM160Q9NX00 188 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 PSORS1C1Q9UIG5 152 aa14.53□□□□□ -0.08
CDK4-208ENST00000551706 TRAV38-1A0A0B4J264 116 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 ANKRD61A6NGH8 418 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 TMEM212A6NML5 194 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 OR4C45A6NMZ5 311 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 GATBO75879 557 aaKnown RBP14.52□□□□□ -0.09
CDK4-208ENST00000551706 SERPINA3P01011 423 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 ETV1P50549 477 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 GPM6AP51674 278 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 ZNF404Q494X3 552 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 CCDC58Q4VC31 144 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 LAIR2Q6ISS4 152 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 WDR82Q6UXN9 313 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 ZNF826PQ6ZT77 177 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 GLCCI1Q86VQ1 547 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 C11orf53Q8IXP5 236 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 ZNF676Q8N7Q3 588 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 BPIFB6Q8NFQ5 453 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 OR10Z1Q8NGY1 313 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 PP6455Q8WZ26 134 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 ANKRD60Q9BZ19 345 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 COMMD4Q9H0A8 199 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 MIOXQ9UGB7 285 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 CDC42EP3Q9UKI2 254 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 HHLA2Q9UM44 414 aa14.52□□□□□ -0.09
CDK4-208ENST00000551706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.52□□□□□ -0.093e-10■■■■□ 20.4
CDK4-208ENST00000551706 TRAV20A0A0B4J274 112 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 OOEPA6NGQ2 149 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 CEACAM18A8MTB9 384 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 ZNF732B4DXR9 585 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 FAM157AC9JC47 383 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 LGALS8O00214 317 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 CDIPTO14735 213 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 XPNPEP2O43895 674 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 ZNF205O95201 554 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 LHBP01229 141 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 MYF6P23409 242 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 RBMXP38159 391 aaKnown RBP14.51□□□□□ -0.09
CDK4-208ENST00000551706 VHLP40337 213 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 FAM201AQ5SY85 155 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 C6orf141Q5SZD1 244 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 DCDC5Q6ZRR9 648 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 NLRC3Q7RTR2 1065 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 RDH10Q8IZV5 341 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 STX19Q8N4C7 294 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 GCSAMQ8N6F7 178 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 OR52N1Q8NH53 320 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 LRRC29Q8WV35 223 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 TMEM186Q96B77 213 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 TMEM246Q9BRR3 403 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 CHST5Q9GZS9 411 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 FGF23Q9GZV9 251 aaPredicted RBP14.51□□□□□ -0.09
CDK4-208ENST00000551706 OR51I2Q9H344 312 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 GPR173Q9NS66 373 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 SCN3BQ9NY72 215 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 SLC7A11Q9UPY5 501 aa14.51□□□□□ -0.09
CDK4-208ENST00000551706 TRBV2A0A0J9YWF9 115 aa14.5□□□□□ -0.09
CDK4-208ENST00000551706 F5H0A9 414 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms