RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LDLRAD3Q86YD5 345 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR5A2Q8NGI9 324 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 C8orf46Q8TAG6 207 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 DCTN5Q9BTE1 182 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 RASL12Q9NYN1 266 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 MDFIC2A0A1B0GVS7 189 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 A0A1W2PPH5 198 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 CLPSL1A2RUU4 121 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 SLC22A31A6NKX4 558 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 M0R1W7 72 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ATP5HO75947 161 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ACAA1P09110 424 aaPredicted RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 FBP1P09467 338 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 GLRA1P23415 457 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ACKR3P25106 362 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 RIDAP52758 137 aaKnown RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 RAG2P55895 527 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 CAV3P56539 151 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 HOXA4Q00056 320 aaPredicted RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 IKZF1Q13422 519 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 PTGES3Q15185 160 aaKnown RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 TMEM236Q5W0B7 351 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 RUSC1-AS1Q66K80 236 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 NCR3LG1Q68D85 454 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 GDPGP1Q6ZNW5 385 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF788Q6ZQV5 615 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 MEPCEQ7L2J0 689 aaKnown RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 VMO1Q7Z5L0 202 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 COMMD2Q86X83 199 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 HS3ST5Q8IZT8 346 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR5K1Q8NHB7 308 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ANGPTL6Q8NI99 470 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 RPL3LQ92901 407 aaKnown RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 LYZL4Q96KX0 146 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR8B4Q96RC9 309 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 CNN2Q99439 309 aaKnown RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 CHIAQ9BZP6 476 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 PBOV1Q9GZY1 135 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR51I2Q9H344 312 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 MOB1AQ9H8S9 216 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAM206AQ9NX38 181 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ONECUT1Q9UBC0 465 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 NLKQ9UBE8 527 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 SLC25A10Q9UBX3 287 aaPredicted RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 ENPP5Q9UJA9 477 aa8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 SOX21Q9Y651 276 aaPredicted RBP8.97□□□□□ -0.97
VTI1BP3-201ENST00000550220 TRBV23-1A0A0A0MS06 115 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR2AT4A6NND4 320 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF732B4DXR9 585 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 G3V2T6 193 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 SIGLEC5O15389 551 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 MDKP21741 143 aaPredicted RBP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 IER3P46695 156 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 GPM6AP51674 278 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 EGR3Q06889 387 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 OCLNQ16625 522 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 NXNL2Q5VZ03 156 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 OLFML2AQ68BL7 652 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF573Q86YE8 665 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZDHHC13Q8IUH4 622 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 FAM216BQ8N7L0 139 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 BBS1Q8NFJ9 593 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR5T2Q8NGG2 359 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR5D13Q8NGL4 314 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 HPSE2Q8WWQ2 592 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 H1FXQ92522 213 aaKnown RBP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 UTP4Q969X6 686 aaKnown RBP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 SLC7A6OSQ96CW6 309 aaPredicted RBP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 METTL8Q9H825 291 aaKnown RBP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 GPR84Q9NQS5 396 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 KRT84Q9NSB2 600 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 C1RLQ9NZP8 487 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 NUFIP1Q9UHK0 495 aaKnown RBP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 IKZF2Q9UKS7 526 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 KLHDC2Q9Y2U9 406 aa8.96□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A0U1RQK1 487 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 hCG_1809904A0A1W2PP81 198 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A1W2PPE2 198 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A1W2PR64 198 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A1W2PRV1 198 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 CCDC182A6NF36 153 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 DHRS7CA6NNS2 312 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 DLGAP1O14490 977 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 AKR7A2O43488 359 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 DHRS3O75911 302 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 PAHP00439 452 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 NRASP01111 189 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 FCGR1AP12314 374 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 NDUFB7P17568 137 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 AMY2BP19961 511 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 OMGP23515 440 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 FASP25445 335 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 GABRA2P47869 451 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 DAPP51397 102 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 UBE2E1P51965 193 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 HCCSP53701 268 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 ACSM1Q08AH1 577 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 ATP6AP1Q15904 470 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms