RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 OR5D14Q8NGL3 314 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 NOX4Q9NPH5 578 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 UFSP2Q9NUQ7 469 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 CCDC168Q8NDH2 2452 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 CYSRT1A8MQ03 144 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 ZNF732B4DXR9 585 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 PIN1P1O15428 100 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 SC5DO75845 299 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 RGS9O75916 674 aaPredicted RBP17.93■□□□□ 0.46
VPS29-206ENST00000549578 ATF1P18846 271 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 TNFRSF1AP19438 455 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 PSMA1P25786 263 aaKnown RBP17.93■□□□□ 0.46
VPS29-206ENST00000549578 MZT1Q08AG7 82 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 TRAM1Q15629 374 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 UNQ9370/PRO34162Q6UXP9 181 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 TMEM91Q6ZNR0 172 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 CEACAM19Q7Z692 300 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 MOGAT3Q86VF5 341 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 CELF2-AS1Q8N7Q2 184 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 OR5A2Q8NGI9 324 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 YIPF5Q969M3 257 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 BARX1Q9HBU1 254 aaPredicted RBP17.93■□□□□ 0.46
VPS29-206ENST00000549578 GCM1Q9NP62 436 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 IGHV1-69-2A0A0G2JMI3 117 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 FAM230AA0A1W2PPH8 454 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 OR5B21A6NL26 309 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 COL8A2P25067 703 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 MAPK3P27361 379 aaPredicted RBP17.92■□□□□ 0.46
VPS29-206ENST00000549578 GNG3P63215 75 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 ZNF154Q13106 437 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 CNN3Q15417 329 aaKnown RBP17.92■□□□□ 0.46
VPS29-206ENST00000549578 LRRC75A-AS1Q8N1F1 130 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 ZNF525Q8N782 197 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 OR1M1Q8NGA1 313 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 OR51A2Q8NGJ7 313 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 ZNF420Q8TAQ5 688 aaPredicted RBP17.92■□□□□ 0.46
VPS29-206ENST00000549578 TECTBQ96PL2 329 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 PPIL3Q9H2H8 161 aaKnown RBP17.92■□□□□ 0.46
VPS29-206ENST00000549578 SLC7A11Q9UPY5 501 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 PPP1R3CQ9UQK1 317 aa17.92■□□□□ 0.46
VPS29-206ENST00000549578 TRAV8-7A0A075B6U6 113 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 PQLC2LA1A4F0 135 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 A6NLC8 198 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 GABRPO00591 440 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 SULT1B1O43704 296 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 PTBP3O95758 552 aaKnown RBP17.91■□□□□ 0.46
VPS29-206ENST00000549578 OCMP0CE72 109 aaPredicted RBP17.91■□□□□ 0.46
VPS29-206ENST00000549578 AZGP1P25311 298 aaKnown RBP17.91■□□□□ 0.46
VPS29-206ENST00000549578 TGFBR2P37173 567 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 CRYBB2P43320 205 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 GATA4P43694 442 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 CARTPTQ16568 116 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 ZNF529Q6P280 563 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 THRSPQ92748 146 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 RDH5Q92781 318 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 DCAF16Q9NXF7 216 aa17.91■□□□□ 0.46
VPS29-206ENST00000549578 TMEM210A6NLX4 147 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 CD36P16671 472 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 RAB3AP20336 220 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 PMELP40967 661 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 ZNF826PQ6ZT77 177 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 CCL17Q92583 94 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 RPL3LQ92901 407 aaKnown RBP17.9■□□□□ 0.46
VPS29-206ENST00000549578 SPACA5Q96QH8 159 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 DYSFO75923 2080 aa17.9■□□□□ 0.46
VPS29-206ENST00000549578 TANC2Q9HCD6 1990 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 IGKV1-27A0A075B6S5 117 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 IGFBP3P17936 291 aaPredicted RBP17.89■□□□□ 0.45
VPS29-206ENST00000549578 FSTP19883 344 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 FUT6P51993 359 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 PPP3R1P63098 170 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 FAM76BQ5HYJ3 339 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 CD200R1LQ6Q8B3 271 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 SPSB1Q96BD6 273 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 TMIGD2Q96BF3 282 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 BORCS8Q96FH0 119 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 OR51I2Q9H344 312 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 FN3KRPQ9HA64 309 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 C1orf123Q9NWV4 160 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 CKLFQ9UBR5 152 aa17.89■□□□□ 0.45
VPS29-206ENST00000549578 RP2O75695 350 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 TFAP2AP05549 437 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 HCKP08631 526 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 UCHL1P09936 223 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 PRKACBP22694 351 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 GADD45AP24522 165 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 MRPS11P82912 194 aaKnown RBP17.88■□□□□ 0.45
VPS29-206ENST00000549578 HFEQ30201 348 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 Q5PR19 223 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 RNF144BQ7Z419 303 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 C11orf53Q8IXP5 236 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 SCCPDHQ8NBX0 429 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 OR51E2Q9H255 320 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 TRDV1A0A1B0GX56 115 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 LRP5LA4QPB2 252 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 CDIPTO14735 213 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 GPX5O75715 221 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 ALX3O95076 343 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 HAAOP46952 286 aa17.88■□□□□ 0.45
VPS29-206ENST00000549578 ART1P52961 327 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms