RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205		A1L4Q6	167 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	AIP	O00170	330 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	MAGEB3	O15480	346 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	CFP	P27918	469 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	APOBEC3A	P31941	199 aa	Predicted RBP	10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	SOX6	P35712	828 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	MMP15	P51511	669 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR8G1	Q15617	311 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	DGUOK	Q16854	277 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	NKPD1	Q17RQ9	610 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	GLT8D1	Q68CQ7	371 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	SFXN4	Q6P4A7	337 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205		Q6ZR03	302 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	LHFPL2	Q6ZUX7	228 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	LYPD6	Q86Y78	171 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	JAGN1	Q8N5M9	183 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR13G1	Q8NGZ3	307 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR5P3	Q8WZ94	311 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	HIST1H2AA	Q96QV6	131 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	METTL17	Q9H7H0	456 aa	Predicted RBP	10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	PTTG2	Q9NZH5	202 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	NAV2	Q8IVL1	2488 aa		10.43	□□□□□ -0.74
ERBB3-208	ENST00000549205	FBN2	P35556	2912 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	FAM230A	A0A1W2PPH8	454 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	PQLC2L	A1A4F0	135 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR5B21	A6NL26	309 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	IFITM5	A6NNB3	132 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	SLC17A2	O00624	439 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	MLNR	O43193	412 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	ZNF93	P35789	620 aa	Predicted RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	RBP2	P50120	134 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	KISS1	Q15726	138 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	EFNB3	Q15768	340 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	C1orf100	Q5SVJ3	147 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	FAM166A	Q6J272	317 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	CRIP3	Q6Q6R5	217 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	RNF144B	Q7Z419	303 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR5A2	Q8NGI9	324 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR8S1	Q8NH09	359 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	GTF3A	Q92664	365 aa	Known RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	DVL3	Q92997	716 aa	Predicted RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	BORCS8	Q96FH0	119 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	CPNE2	Q96FN4	548 aa	Predicted RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	SPACA5	Q96QH8	159 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	MICU1	Q9BPX6	476 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	UQCC2	Q9BRT2	126 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	RTL8A	Q9BWD3	113 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	SLIRP	Q9GZT3	109 aa	Known RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	FGF23	Q9GZV9	251 aa	Predicted RBP	10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	PLGRKT	Q9HBL7	147 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	MSL2	Q9HCI7	577 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	CYSLTR2	Q9NS75	346 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	PMF1-BGLAP	U3KQ54	211 aa		10.42	□□□□□ -0.74
ERBB3-208	ENST00000549205	ASH1L	Q9NR48	2969 aa	Known RBP	10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	IGKV1-27	A0A075B6S5	117 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	FAM221A	A4D161	298 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	ZSCAN5B	A6NJL1	495 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	ZNF732	B4DXR9	585 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205		B9A039	149 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205		H0YL77	283 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	HS3ST1	O14792	307 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	TMEM127	O75204	238 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	SLC2A2	P11168	524 aa	Predicted RBP	10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	COX6B1	P14854	86 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	THBS2	P35442	1172 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	ALDH3B1	P43353	468 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	GPM6A	P51674	278 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	ATP1B3	P54709	279 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	MTCP1	P56278	107 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	GNG3	P63215	75 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	RIN1	Q13671	783 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	RAB11B	Q15907	218 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	IDNK	Q5T6J7	187 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	HES5	Q5TA89	166 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	SP5	Q6BEB4	398 aa	Predicted RBP	10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	FBXL14	Q8N1E6	418 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	SPERT	Q8NA61	448 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR10AD1	Q8NGE0	317 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	OR6M1	Q8NGM8	313 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	FBXW5	Q969U6	566 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	KCTD12	Q96CX2	325 aa	Known RBP	10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	RNF170	Q96K19	258 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	SORCS2	Q96PQ0	1159 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	GPER1	Q99527	375 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	NKX3-1	Q99801	234 aa	Predicted RBP	10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	STEAP1	Q9UHE8	339 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	DAPK2	Q9UIK4	370 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	ZDHHC8	Q9ULC8	765 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	A3GALT2	U3KPV4	340 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205	NBPF19	A0A087WUL8	3843 aa		10.41	□□□□□ -0.74
ERBB3-208	ENST00000549205		A0A1W2PPR1	153 aa		10.4	□□□□□ -0.74
ERBB3-208	ENST00000549205		F5H5P2	479 aa		10.4	□□□□□ -0.74
ERBB3-208	ENST00000549205		M0R233	179 aa		10.4	□□□□□ -0.74
ERBB3-208	ENST00000549205	HTR2C	P28335	458 aa		10.4	□□□□□ -0.74
ERBB3-208	ENST00000549205	ZNF81	P51508	661 aa		10.4	□□□□□ -0.74
ERBB3-208	ENST00000549205	ZP1	P60852	638 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms