RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PPP3CBP16298 524 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 HTR2CP28335 458 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 TPTEP56180 551 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 CLDN12P56749 244 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 FAM57BQ71RH2 274 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF554Q86TJ5 538 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 DUSP18Q8NEJ0 188 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 OR52H1Q8NGJ2 320 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 OR1F12Q8NHA8 337 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 SMIM4Q8WVI0 70 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 AKAP1Q92667 903 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■■□ 22.3
CTDSP2-204ENST00000548823 FAM3DQ96BQ1 224 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF799Q96GE5 643 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 UQCC2Q9BRT2 126 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 GPR84Q9NQS5 396 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 GLRX2Q9NS18 164 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 SLC7A10Q9NS82 523 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF587BE7ETH6 402 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 LYRM1O43325 122 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ALDOBP05062 364 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF20P17024 532 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 SRSF2Q01130 221 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 GALK2Q01415 458 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ANKRD16Q6P6B7 361 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ABHD12BQ7Z5M8 362 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 CADM3Q8N126 398 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF610Q8N9Z0 462 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 OR14K1Q8NGZ2 314 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 YIPF5Q969M3 257 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 APH1AQ96BI3 265 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ADAT3Q96EY9 351 aaPredicted RBP17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 PLPPR2Q96GM1 343 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 SORCS2Q96PQ0 1159 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 C7orf50Q9BRJ6 194 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF319Q9P2F9 582 aa17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 YLPM1P49750 1951 aaKnown RBP17.18■□□□□ 0.34
CTDSP2-204ENST00000548823 DHRS7CA6NNS2 312 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 DOK2O60496 412 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 LMX1BO60663 402 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 MMP7P09237 267 aaPredicted RBP17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 B4GALT1P15291 398 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF32P17041 273 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 RAB3AP20336 220 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 POU3F4P49335 361 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 MADCAM1Q13477 382 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 C2orf76Q3KRA6 126 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 ADAM5Q6NVV9 412 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 SLC16A14Q7RTX9 510 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 OR51D1Q8NGF3 324 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 OR51A2Q8NGJ7 313 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 ITPKCQ96DU7 683 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 OR2H1Q9GZK4 316 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 SHARPINQ9H0F6 387 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF391Q9UJN7 358 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 CLEC4AQ9UMR7 237 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 RHBDD3Q9Y3P4 386 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 V9GYS6 101 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 FREM1Q5H8C1 2179 aa17.17■□□□□ 0.34
CTDSP2-204ENST00000548823 A0A0A6YYH2 397 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 A6NIN4 97 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 A6NJ64 397 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 SLC22A20A6NK97 555 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 F5H5K5 113 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 GABARAPH6UMI1 98 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 LDLRAD4O15165 306 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 XRCC3O43542 346 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 IGHV4-39P01824 125 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 FAM157BP0CG42 384 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 COX5BP10606 129 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 SLC2A1P11166 492 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 THBS4P35443 961 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 CDKN1AP38936 164 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 PSG4Q00888 419 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 GLYATL3Q5SZD4 288 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF57Q68EA5 555 aaPredicted RBP17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 DPPA2Q7Z7J5 298 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 SKA3Q8IX90 412 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 ITFG2Q969R8 447 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 NEURL2Q9BR09 285 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 WNT5BQ9H1J7 359 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 OR10A2Q9H208 303 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 METTL17Q9H7H0 456 aaPredicted RBP17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 DIABLOQ9NR28 239 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 FBLN5Q9UBX5 448 aa17.16■□□□□ 0.34
CTDSP2-204ENST00000548823 KCNAB3O43448 404 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 SSX4O60224 188 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 MTRF1O75570 445 aaKnown RBP17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 SOD3P08294 240 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 DANCRP0C864 163 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 RAB6AP20340 208 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 GNALP38405 381 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 ARF1P84077 181 aaKnown RBP17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 SPOCK1Q08629 439 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 DYRK1AQ13627 763 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 TMEM249Q2WGJ8 235 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 TMEM69Q5SWH9 247 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 ENKURQ8TC29 256 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 NEDD4LQ96PU5 975 aa17.15■□□□□ 0.34
CTDSP2-204ENST00000548823 NPAP1Q9NZP6 1156 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms