RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TMPRSS13Q9BYE2 586 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 ACKR4Q9NPB9 350 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 MRPS18CQ9Y3D5 142 aaKnown RBP10.36□□□□□ -0.75
CCDC38-202ENST00000546386 H7C417 338 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 NOS1APO75052 506 aaPredicted RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 GLI4P10075 376 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 MGMTP16455 207 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 PSMB1P20618 241 aaKnown RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 BLVRBP30043 206 aaPredicted RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 OPRM1P35372 400 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 HIST1H3AP68431 136 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 QRFPP83859 136 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 HIST2H3PS2Q5TEC6 136 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 OR2T2Q6IF00 324 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 HIST2H3AQ71DI3 136 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 CXorf67Q86X51 503 aaPredicted RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 SLC7A5P1Q8MH63 180 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 CISD2Q8N5K1 135 aaKnown RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 MED28Q9H204 178 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 CA10Q9NS85 328 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 PARPBPQ9NWS1 579 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 MTFP1Q9UDX5 166 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 TRAV17A0A0B4J275 112 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 IGKV1-12A0A0C4DH73 117 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 FABP7O15540 132 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 DNPH1O43598 174 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 NRASP01111 189 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 IGKV1D-12P01611 117 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 NHLH1Q02575 133 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 ARFRP1Q13795 201 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 C1orf100Q5SVJ3 147 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 STEAP1BQ6NZ63 245 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 FOXL2NBQ6ZUU3 175 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 ZADH2Q8N4Q0 377 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 PCNPQ8WW12 178 aaKnown RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 SLC6A7Q99884 636 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 FAAP24Q9BTP7 215 aa10.35□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF701Q9NV72 531 aaPredicted RBP10.35□□□□□ -0.75
CCDC38-202ENST00000546386 IGKV3D-15A0A087WSY6 115 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 MEGF11A6BM72 1044 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 HMX3A6NHT5 357 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF891A8MT65 544 aaPredicted RBP10.34□□□□□ -0.75
CCDC38-202ENST00000546386 LDLRAD4O15165 306 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 RAB3DO95716 219 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 TFF1P04155 84 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 IGHV1-2P23083 117 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 CD82P27701 267 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 WNT5AP41221 380 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 RRAS2P62070 204 aaPredicted RBP10.34□□□□□ -0.75
CCDC38-202ENST00000546386 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 GABRG1Q8N1C3 465 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 RAB3CQ96E17 227 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 OR51J1Q9H342 316 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 UBE2QL1A1L167 161 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 METTL21EPA6NDL7 271 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 GEMIN2O14893 280 aaKnown RBP10.34□□□□□ -0.75
CCDC38-202ENST00000546386 SSX5O60225 188 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 CYB5AP00167 134 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC38-202ENST00000546386 SSTR2P30874 369 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF133P52736 654 aaPredicted RBP10.34□□□□□ -0.75
CCDC38-202ENST00000546386 RIPPLY1Q0D2K3 151 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 DRAM2Q6UX65 266 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 RFPL4BQ6ZWI9 263 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 PGAP1Q75T13 922 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 C17orf78Q8N4C9 275 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 NKAIN3Q8N8D7 197 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 RNF122Q9H9V4 155 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 BCO1Q9HAY6 547 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 TP53TG5Q9Y2B4 290 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 CACNA1AO00555 2505 aa10.34□□□□□ -0.75
CCDC38-202ENST00000546386 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 GSTZ1O43708 216 aaPredicted RBP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ACTL6AO96019 429 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 DHFRP00374 187 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 CXADRP78310 365 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF260Q3ZCT1 412 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 RIPPLY2Q5TAB7 128 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 SLC25A26Q70HW3 274 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 RBMXL3Q8N7X1 1067 aaKnown RBP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF610Q8N9Z0 462 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 OR52H1Q8NGJ2 320 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 OR10R2Q8NGX6 335 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 AKAP1Q92667 903 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ZC3HAV1LQ96H79 300 aaKnown RBP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 CHST5Q9GZS9 411 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 FGF23Q9GZV9 251 aaPredicted RBP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 GHITMQ9H3K2 345 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 MOV10Q9HCE1 1003 aaKnown RBP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ZNF736B4DX44 427 aaPredicted RBP10.33□□□□□ -0.76
CCDC38-202ENST00000546386 KCNAB3O43448 404 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 CA6P23280 308 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 HAAOP46952 286 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ZP1P60852 638 aa10.33□□□□□ -0.76
CCDC38-202ENST00000546386 ECH1Q13011 328 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms