RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 FREM3P0C091 2139 aa2.14□□□□□ -2.07
SNHG1-224ENST00000545688 TRGV5A0A0B4J1U4 118 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 TXNDC9O14530 226 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SMC2O95347 1197 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 C1orf105O95561 183 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 FGFR1OPO95684 399 aaKnown RBP2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CD8AP01732 235 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 GZMAP12544 262 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 PGCP20142 388 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 PSMB5P28074 263 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CCR7P32248 378 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 GLP1RP43220 463 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SLCO1A2P46721 670 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 UBE2AP49459 152 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 OR4D2P58180 307 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SPIBQ01892 262 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 ITIH4Q14624 930 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 GUSBP1Q15486 140 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 TAF1AQ15573 450 aaPredicted RBP2.13□□□□□ -2.07
SNHG1-224ENST00000545688 STK11Q15831 433 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 PRSS8Q16651 343 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 PGGHGQ32M88 737 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CCSMST1Q4G0I0 132 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF311Q5JNZ3 666 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 NIPAL3Q6P499 406 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 DCUN1D2Q6PH85 259 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF620Q6ZNG0 422 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 DPY19L4Q7Z388 723 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 NEGR1Q7Z3B1 354 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SNX20Q7Z614 316 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SLC26A11Q86WA9 606 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CALHM3Q86XJ0 350 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 KDM8Q8N371 416 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 C2orf73Q8N5S3 287 aaPredicted RBP2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CCDC54Q8NEL0 328 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 B3GNT7Q8NFL0 401 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 OR4F15Q8NGB8 312 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 OR10G9Q8NGN4 311 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 OR13C4Q8NGS5 318 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 OR51Q1Q8NH59 317 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 MCOLN3Q8TDD5 553 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CAPZA3Q96KX2 299 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 ZFP3Q96NJ6 502 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 RNF157Q96PX1 679 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 COPS8Q99627 209 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SLC35A5Q9BS91 424 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SFXN3Q9BWM7 321 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 DNTTIP1Q9H147 329 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SPNS1Q9H2V7 528 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 NUDT15Q9NV35 164 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 AIPL1Q9NZN9 384 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 CLCF1Q9UBD9 225 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 YARS2Q9Y2Z4 477 aaKnown RBP2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SLC25A15Q9Y619 301 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 ARL5AQ9Y689 179 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 SLC22A7Q9Y694 548 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 HEATR5AQ86XA9 2040 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 PLCE1Q9P212 2302 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 HEATR5BQ9P2D3 2071 aa2.13□□□□□ -2.07
SNHG1-224ENST00000545688 A0A1B0GUS0 222 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 G3V4G9 280 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 TCF21O43680 179 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 STAMBPO95630 424 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 AGTP01019 485 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 IGKV1D-16P01601 117 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 C1QAP02745 245 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 UQCRHP07919 91 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 ANXA5P08758 320 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 TLX1NBP0CAT3 122 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 SMIM10L1P0DMW3 83 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 CCL3P10147 92 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 RALBP11234 206 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 ETS1P14921 441 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 TBXA2RP21731 343 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 FOXN2P32314 431 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 BTCP35070 178 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 UGT2B10P36537 528 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 CD79BP40259 229 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 DAP3P51398 398 aaKnown RBP2.12□□□□□ -2.07
SNHG1-224ENST00000545688 SSR4P51571 173 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 POLR2FP61218 127 aaKnown RBP2.12□□□□□ -2.07
SNHG1-224ENST00000545688 BTG2P78543 158 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 REG3AQ06141 175 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 PRDX1Q06830 199 aaKnown RBP2.12□□□□□ -2.07
SNHG1-224ENST00000545688 PIGHQ14442 188 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-224ENST00000545688 PDK2Q15119 407 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF791Q3KP31 576 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-224ENST00000545688 BEX5Q5H9J7 111 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 CCDC122Q5T0U0 273 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 PPP1R2P3Q6NXS1 205 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 BRD3OSQ6XYD6 125 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 RTL4Q6ZR62 310 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 GLT6D1Q7Z4J2 308 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 TMEM156Q8N614 296 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 OR4K2Q8NGD2 314 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 OR8K3Q8NH51 312 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 OR52P1PQ8NH57 321 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 SYNPRQ8TBG9 265 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 LKAAEAR1Q8TD35 194 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 RAD51AP1Q96B01 352 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms