RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 VAMP5O95183 116 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 UTS2O95399 124 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-216ENST00000545170 GDF1P27539 372 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 CST5P28325 142 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-216ENST00000545170 MVDP53602 400 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 DLX1P56177 255 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 TMEM176BQ3YBM2 270 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-216ENST00000545170 NUFIP2Q7Z417 695 aaKnown RBP7.79□□□□□ -1.16
ATXN3-216ENST00000545170 SYS1Q8N2H4 156 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 PEF1Q9UBV8 284 aaKnown RBP7.79□□□□□ -1.16
ATXN3-216ENST00000545170 CD207Q9UJ71 328 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 SLC5A6Q9Y289 635 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 TECPR2O15040 1411 aa7.79□□□□□ -1.16
ATXN3-216ENST00000545170 ANKRD26Q9UPS8 1709 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 A0A1W2PQU0 124 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 PRAMEF26H0Y7S4 382 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 MRPL33O75394 65 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 BMI1P35226 326 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 RPL27P61353 136 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 IFITM2Q01629 132 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 USP53Q70EK8 1073 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 NUP37Q8NFH4 326 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 NUDT10Q8NFP7 164 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 OR10AD1Q8NGE0 317 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 OR11L1Q8NGX0 322 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 UBTD2Q8WUN7 234 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SHISA4Q96DD7 197 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 LRRC3BQ96PB8 259 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SPHK2Q9NRA0 654 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SLC45A2Q9UMX9 530 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 BCL9O00512 1426 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SLC25A17O43808 307 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 S100A4P26447 101 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 RBM11P57052 281 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 COX19Q49B96 90 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 ATOH1Q92858 354 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 METTL1Q9UBP6 276 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 TINAGQ9UJW2 476 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 PEAK1Q9H792 1746 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 ARRDC5A6NEK1 342 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 C4orf47A7E2U8 309 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 GALR2O43603 387 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 FZD2Q14332 565 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 GAMTQ14353 236 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SLAMF6Q96DU3 332 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SLC25A37Q9NYZ2 338 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SLC22A13Q9Y226 551 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 TMEM184BQ9Y519 407 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 GPR75O95800 540 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 EN2P19622 333 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 HOXA10P31260 410 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 PMCHL1Q16048 86 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 GJC3Q8NFK1 279 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 UBALD1Q8TB05 177 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 TMED3Q9Y3Q3 217 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 CLDN16Q9Y5I7 305 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 R4GMQ9 66 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 IGHA2P01877 340 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 SBK3P0C264 359 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 MMP9P14780 707 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 ATF1P18846 271 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 MMP16P51512 607 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 LSM11P83369 360 aaKnown RBP eCLIP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 RNF165Q6ZSG1 346 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 TMEFF1Q8IYR6 380 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 CBARPQ8N350 705 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 OR2C3Q8N628 320 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 MYOZ3Q8TDC0 251 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 ZC3HAV1LQ96H79 300 aaKnown RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 ALX4Q9H161 411 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-216ENST00000545170 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 BCL9LQ86UU0 1499 aa7.78□□□□□ -1.16
ATXN3-216ENST00000545170 TCRBV21S2A2A0A5A6 115 aa7.77□□□□□ -1.16
ATXN3-216ENST00000545170 ZBTB42B2RXF5 422 aa7.77□□□□□ -1.16
ATXN3-216ENST00000545170 HSD11B1LQ7Z5J1 315 aa7.77□□□□□ -1.16
ATXN3-216ENST00000545170 ABHD3Q8WU67 409 aa7.77□□□□□ -1.16
ATXN3-216ENST00000545170 CLDND1Q9NY35 253 aa7.77□□□□□ -1.16
ATXN3-216ENST00000545170 STARD10Q9Y365 291 aa7.77□□□□□ -1.16
ATXN3-216ENST00000545170 FAM208AQ9UK61 1670 aaKnown RBP7.77□□□□□ -1.16
ATXN3-216ENST00000545170 LOC389332A0A1B0GUA5 103 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 CA1P00915 261 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-216ENST00000545170 XKR7Q5GH72 579 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 FCRL6Q6DN72 434 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 FAM71E1Q6IPT2 247 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 CLEC18BQ6UXF7 455 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 MRPS24Q96EL2 167 aaKnown RBP7.77□□□□□ -1.17
ATXN3-216ENST00000545170 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 PHRF1Q9P1Y6 1649 aaKnown RBP7.77□□□□□ -1.17
ATXN3-216ENST00000545170 OR2T8A6NH00 312 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 PGA4P0DJD7 388 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 PGA5P0DJD9 388 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 SELEP16581 610 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 CD70P32970 193 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 CSNK1EP49674 416 aaKnown RBP7.77□□□□□ -1.17
ATXN3-216ENST00000545170 PRTGQ2VWP7 1150 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 PARM1Q6UWI2 310 aa7.77□□□□□ -1.17
ATXN3-216ENST00000545170 ARRDC1Q8N5I2 433 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms