RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 AGAP6Q5VW22 663 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 RSBN1Q5VWQ0 802 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-218ENST00000543939 PLCXD3Q63HM9 321 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 OLFML2AQ68BL7 652 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 ZGRF1Q86YA3 2104 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 CSNK2A3Q8NEV1 391 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 OR10R2Q8NGX6 335 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 RNF170Q96K19 258 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-218ENST00000543939 ZMAT3Q9HA38 289 aaKnown RBP17.1■□□□□ 0.33
COPS7A-218ENST00000543939 SLC7A11Q9UPY5 501 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 A0A0B4J293 547 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 NAP1L6A6NFF2 107 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 ZNF850A8MQ14 1090 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 CST4P01036 141 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 IGKV3-15P01624 115 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 LPLP06858 475 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 MELTFP08582 738 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 GIFP27352 417 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 ID4P47928 161 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 MRPL49Q13405 166 aaKnown RBP17.09■□□□□ 0.33
COPS7A-218ENST00000543939 CARTPTQ16568 116 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 DOLPP1Q86YN1 238 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 CREB3L1Q96BA8 519 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 S100A13Q99584 98 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 SFXN3Q9BWM7 321 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 CACNG6Q9BXT2 260 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 CDH20Q9HBT6 801 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 OBP2BQ9NPH6 170 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 TAS2R8Q9NYW2 309 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 CRIM1Q9NZV1 1036 aa17.09■□□□□ 0.33
COPS7A-218ENST00000543939 ELF5Q9UKW6 265 aaPredicted RBP17.09■□□□□ 0.33
COPS7A-218ENST00000543939 TMEM235A6NFC5 223 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 PRRG2O14669 202 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 TMEM225BP0DP42 221 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 ATP1B3P54709 279 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 RPS27AP62979 156 aaKnown RBP17.08■□□□□ 0.32
COPS7A-218ENST00000543939 CDNFQ49AH0 187 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 TMEM255AQ5JRV8 349 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 GFRALQ6UXV0 394 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 ASCL4Q6XD76 172 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 Q6ZTK2 550 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 BHLHA15Q7RTS1 189 aaPredicted RBP17.08■□□□□ 0.32
COPS7A-218ENST00000543939 FAM89BQ8N5H3 189 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 CHST4Q8NCG5 386 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 URM1Q9BTM9 101 aaKnown RBP17.08■□□□□ 0.32
COPS7A-218ENST00000543939 GPR160Q9UJ42 338 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 ZNF835Q9Y2P0 537 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 IGF2RP11717 2491 aa17.08■□□□□ 0.32
COPS7A-218ENST00000543939 CD300LBA8K4G0 201 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 SMPD2O60906 423 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 TCRBP04435 133 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 CSF1P09603 554 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 MGMTP16455 207 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 PRDX4Q13162 271 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 PCGF3Q3KNV8 242 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 PRR30Q53SZ7 412 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-218ENST00000543939 ZNF474Q6S9Z5 364 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-218ENST00000543939 OR10K1Q8NGX5 313 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 PAPOLGQ9BWT3 736 aaKnown RBP17.07■□□□□ 0.32
COPS7A-218ENST00000543939 SELENOIQ9C0D9 397 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 OR51B6Q9H340 312 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 ASF1BQ9NVP2 202 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 NPAP1Q9NZP6 1156 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 COPZ2Q9P299 210 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 EIF3KQ9UBQ5 218 aaKnown RBP17.07■□□□□ 0.32
COPS7A-218ENST00000543939 ATMQ13315 3056 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 MEIS3P1A6NDR6 274 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 C1QTNF9BB2RNN3 333 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 INMT-MINDY4F8WBC2 141 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 SOCS1O15524 211 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 AGFG2O95081 481 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 C1QTNF9P0C862 333 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 SERPINA2P20848 420 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 CCR6P51684 374 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 BTG1P62324 171 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 OR56B1Q8NGI3 324 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 TM2D1Q9BX74 207 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 METTL9Q9H1A3 318 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 NUBP2Q9Y5Y2 271 aa17.07■□□□□ 0.32
COPS7A-218ENST00000543939 OR5H1A6NKK0 313 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 SPRY1O43609 319 aaPredicted RBP17.06■□□□□ 0.32
COPS7A-218ENST00000543939 HNRNPCP07910 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
COPS7A-218ENST00000543939 ACTBP60709 375 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 ACTG1P63261 375 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 FBXW12Q6X9E4 464 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 FTMTQ8N4E7 242 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 STEAP2Q8NFT2 490 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 C1QTNF6Q9BXI9 259 aa17.06■□□□□ 0.32
COPS7A-218ENST00000543939 ELL3Q9HB65 397 aaPredicted RBP17.06■□□□□ 0.32
COPS7A-218ENST00000543939 BSNQ9UPA5 3926 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 PQLC2LA1A4F0 135 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 FOXI3A8MTJ6 420 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-218ENST00000543939 ANGPTL7O43827 346 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 IGLV1-44P01699 117 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 GNB3P16520 340 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 TMEM50BP56557 158 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 PPP1CBP62140 327 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 CD300CQ08708 224 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms