RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TBC1D19Q8N5T2 526 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 NOXO1Q8NFA2 376 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 OR51S1Q8NGJ8 323 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 OR10R2Q8NGX6 335 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 OR52N1Q8NH53 320 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 OR9G1Q8NH87 305 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF420Q8TAQ5 688 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 MCOLN3Q8TDD5 553 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C1orf54Q8WWF1 131 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 DNAJC19Q96DA6 116 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 PIK3IP1Q96FE7 263 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 DCUN1D1Q96GG9 259 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C18orf12Q96KH6 178 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 THTPAQ9BU02 230 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 RIOK2Q9BVS4 552 aaKnown RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 UGT1A7Q9HAW7 530 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 UGT1A8Q9HAW9 530 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SCRT2Q9NQ03 307 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 PARVAQ9NVD7 372 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 NYAP2Q9P242 653 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CYB5R1Q9UHQ9 305 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 DDX60LQ5H9U9 1706 aaKnown RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C5orf42Q9H799 3197 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ALPK3Q96L96 1907 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CHD9Q3L8U1 2897 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 MYH11P35749 1972 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 OTOFQ9HC10 1997 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 BAZ2AQ9UIF9 1905 aaKnown RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A0G2JLM5 398 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A0G2JND7 137 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A1W2PQ72 361 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 MGAT4DA6NG13 374 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF726A6NNF4 738 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 F8W036 122 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 J3QRK9 145 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 K7EMT4 169 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 PRMT5O14744 637 aaPredicted RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 GALR3O60755 368 aaPredicted RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 DPM1O60762 260 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 NDUFS6O75380 124 aaKnown RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 BANF1O75531 89 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 LYPLA1O75608 230 aaPredicted RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 RBBP9O75884 186 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 CST4P01036 141 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 GLAP06280 429 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 FOLR1P15328 257 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 CD1EP15812 388 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 NELFEP18615 380 aaKnown RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 UGT2B10P36537 528 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 SERPINB5P36952 375 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC25A1P53007 311 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 TGFBR3Q03167 851 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 TWF1Q12792 350 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 TNXAQ16473 311 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 ZBED5Q49AG3 693 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 TEX30Q5JUR7 227 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 C6orf52Q5T4I8 152 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 HES5Q5TA89 166 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF470Q6ECI4 717 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 C18orf65Q6ZTR6 163 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 SETD3Q86TU7 594 aaPredicted RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 SNX31Q8N9S9 440 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 VN1R2Q8NFZ6 395 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 OR2A1Q8NGT9 310 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 SDR42E1Q8WUS8 393 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 RASL10AQ92737 203 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 MARC2Q969Z3 335 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 RPEQ96AT9 228 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 KLF6Q99612 283 aaPredicted RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 DOK1Q99704 481 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 FOXC2Q99958 501 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 C1orf50Q9BV19 199 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 C19orf24Q9BVV8 132 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 KIFC1Q9BW19 673 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 UBE2ZQ9H832 354 aaPredicted RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 KCNJ16Q9NPI9 418 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 XPNPEP1Q9NQW7 623 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 WWOXQ9NZC7 414 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 TMEM9Q9P0T7 183 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 BTNL2Q9UIR0 455 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 STOML2Q9UJZ1 356 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 RAB26Q9ULW5 256 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 ACOT9Q9Y305 439 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 PRELID3BQ9Y3B1 194 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 AP4S1Q9Y587 144 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 FASNP49327 2511 aaKnown RBP3□□□□□ -1.93
SFSWAP-211ENST00000542813 TANC1Q9C0D5 1861 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 USP34Q70CQ2 3546 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 FRMPD3Q5JV73 1810 aa3□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF292O60281 2723 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNFX1Q9P2E3 1918 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CLUHO75153 1309 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 FAM208BQ5VWN6 2430 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 GPR179Q6PRD1 2367 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A0B4J2A0 478 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A1W2PRG6 482 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 PQLC2LA1A4F0 135 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 PRR23AA6NEV1 266 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 IFITM10A6NMD0 228 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms