RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TMEM210A6NLX4 147 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 CDKN1AP38936 164 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 CCL8P80075 99 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 TESK1Q15569 626 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 C22orf42Q6IC83 251 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 NRGNQ92686 78 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 BORCS8Q96FH0 119 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 OR2V2Q96R30 315 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 SNTG1Q9NSN8 517 aa19.62■□□□□ 0.73
HOMER3-205ENST00000542541 DSCAMO60469 2012 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 IGKV1-9A0A0C4DH69 117 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 MEGF11A6BM72 1044 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 AZGP1P25311 298 aaKnown RBP19.61■□□□□ 0.73
HOMER3-205ENST00000542541 CALRP27797 417 aaKnown RBP19.61■□□□□ 0.73
HOMER3-205ENST00000542541 RBP2P50120 134 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 GPM6AP51674 278 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 MAB21L1Q13394 359 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 BLMHQ13867 455 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 DMRTC1Q5HYR2 192 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 ASPHD2Q6ICH7 369 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 ANKRD13BQ86YJ7 626 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 CPNE2Q96FN4 548 aaPredicted RBP19.61■□□□□ 0.73
HOMER3-205ENST00000542541 MEGF10Q96KG7 1140 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 PPIL3Q9H2H8 161 aaKnown RBP19.61■□□□□ 0.73
HOMER3-205ENST00000542541 SAP30LQ9HAJ7 183 aa19.61■□□□□ 0.73
HOMER3-205ENST00000542541 TRAV8-7A0A075B6U6 113 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 FAM230AA0A1W2PPH8 454 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 ZNF732B4DXR9 585 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 ALDOBP05062 364 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 HCKP08631 526 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 MYL9P24844 172 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 BDKRB2P30411 391 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 GPR107Q5VW38 600 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 LHFPL2Q6ZUX7 228 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 SATL1Q86VE3 508 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 TRMT10AQ8TBZ6 339 aaKnown RBP19.6■□□□□ 0.73
HOMER3-205ENST00000542541 NPRL2Q8WTW4 380 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 KCTD7Q96MP8 289 aa19.6■□□□□ 0.73
HOMER3-205ENST00000542541 TACC2O95359 2948 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 ARFGEF3Q5TH69 2177 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 TRAV1-2A0A0B4J238 106 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 PQLC2LA1A4F0 135 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 DNASE1P24855 282 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 THBS2P35442 1172 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 ATP1B3P54709 279 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 MTCP1P56278 107 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 FAM76BQ5HYJ3 339 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 ZNF573Q86YE8 665 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 OR51A2Q8NGJ7 313 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 ITLN1Q8WWA0 313 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 ERGIC1Q969X5 290 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 SORCS2Q96PQ0 1159 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 PLEKHA6Q9Y2H5 1048 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 APCP25054 2843 aa19.59■□□□□ 0.73
HOMER3-205ENST00000542541 LOC100289279A0A1B0GTE1 492 aa19.58■□□□□ 0.73
HOMER3-205ENST00000542541 PTBP3O95758 552 aaKnown RBP19.58■□□□□ 0.73
HOMER3-205ENST00000542541 MAS1P04201 325 aa19.58■□□□□ 0.73
HOMER3-205ENST00000542541 GRPP07492 148 aa19.58■□□□□ 0.73
HOMER3-205ENST00000542541 GATA4P43694 442 aa19.58■□□□□ 0.73
HOMER3-205ENST00000542541 NKAIN3Q8N8D7 197 aa19.58■□□□□ 0.73
HOMER3-205ENST00000542541 RPL3LQ92901 407 aaKnown RBP19.58■□□□□ 0.73
HOMER3-205ENST00000542541 ZNF701Q9NV72 531 aaPredicted RBP19.58■□□□□ 0.73
HOMER3-205ENST00000542541 AKAP6Q13023 2319 aa19.58■□□□□ 0.73
HOMER3-205ENST00000542541 LRBAP50851 2863 aa19.58■□□□□ 0.72
HOMER3-205ENST00000542541 SETXQ7Z333 2677 aaKnown RBP19.58■□□□□ 0.72
HOMER3-205ENST00000542541 LRP5LA4QPB2 252 aa19.58■□□□□ 0.72
HOMER3-205ENST00000542541 F12P00748 615 aaPredicted RBP19.58■□□□□ 0.72
HOMER3-205ENST00000542541 EFNA4P52798 201 aa19.58■□□□□ 0.72
HOMER3-205ENST00000542541 CDH26Q8IXH8 852 aa19.58■□□□□ 0.72
HOMER3-205ENST00000542541 LURAP1Q96LR2 239 aa19.58■□□□□ 0.72
HOMER3-205ENST00000542541 CENPOQ9BU64 300 aa19.58■□□□□ 0.72
HOMER3-205ENST00000542541 FGF23Q9GZV9 251 aaPredicted RBP19.58■□□□□ 0.72
HOMER3-205ENST00000542541 ABCA12Q86UK0 2595 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 PDCD5O14737 125 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 PAX1P15863 534 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 PSMD7P51665 324 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 ZNF154Q13106 437 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 DDI2Q5TDH0 399 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 CLVS1Q8IUQ0 354 aaPredicted RBP19.57■□□□□ 0.72
HOMER3-205ENST00000542541 NINJ1Q92982 152 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 OR51I2Q9H344 312 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 FN3KRPQ9HA64 309 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 BEX4Q9NWD9 120 aaPredicted RBP19.57■□□□□ 0.72
HOMER3-205ENST00000542541 SPG11Q96JI7 2443 aa19.57■□□□□ 0.72
HOMER3-205ENST00000542541 ITPR2Q14571 2701 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 TRIM64BA6NI03 449 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 GABARAPO95166 117 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 HPXP02790 462 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 HAAOP46952 286 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 MTNR1BP49286 362 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 MRPS11P82912 194 aaKnown RBP19.56■□□□□ 0.72
HOMER3-205ENST00000542541 KISS1Q15726 138 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 WDR86Q86TI4 376 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 LRRTM1Q86UE6 522 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 TPRA1Q86W33 373 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 OR52N4Q8NGI2 321 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 FOXRED1Q96CU9 486 aaPredicted RBP19.56■□□□□ 0.72
HOMER3-205ENST00000542541 BARX1Q9HBU1 254 aaPredicted RBP19.56■□□□□ 0.72
HOMER3-205ENST00000542541 PPP1R3CQ9UQK1 317 aa19.56■□□□□ 0.72
HOMER3-205ENST00000542541 IGHV3-64DA0A0J9YX35 117 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms