RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 M0R1W7 72 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 ANGPTL7O43827 346 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 CCNB2O95067 398 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 PSG2P11465 335 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 SLC15A1P46059 708 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 BMXP51813 675 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 FAM189A2Q15884 450 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 FAM76BQ5HYJ3 339 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 SAMD4BQ5PRF9 694 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 Q6ZTK2 550 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 MKXQ8IYA7 352 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 DYNAPQ8N1N2 210 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 CSNK2A3Q8NEV1 391 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 OR2T33Q8NG76 320 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 OR8B12Q8NGG6 310 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 OR52H1Q8NGJ2 320 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 PIGCQ92535 297 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 DMRTB1Q96MA1 342 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 DNTTIP1Q9H147 329 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 OR10A2Q9H208 303 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 METTL8Q9H825 291 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 CMC2Q9NRP2 79 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 NLKQ9UBE8 527 aa12.56□□□□□ -0.4
CLSTN3-213ENST00000541953 ANXA2P2A6NMY6 339 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 KRT36O76013 467 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 GSTT1P30711 240 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 KIR2DS4P43632 304 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 GABRA2P47869 451 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 CEBPDP49716 269 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 GPM6AP51674 278 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 CAV3P56539 151 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 IL5RAQ01344 420 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 ACSM1Q08AH1 577 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 CEP78Q5JTW2 689 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 KCTD8Q6ZWB6 473 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 FAM185AQ8N0U4 392 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 TMEM185AQ8NFB2 350 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 RNF170Q96K19 258 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 ZNF488Q96MN9 340 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 FAM107BQ9H098 131 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 YY1AP1Q9H869 796 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 MPC1Q9Y5U8 109 aa12.55□□□□□ -0.4
CLSTN3-213ENST00000541953 TMEM210A6NLX4 147 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 ADARB2-AS1A8MUL3 147 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 PRR32B1ATL7 298 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 GLCEO94923 617 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 CST4P01036 141 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 H2BFMP0C1H6 154 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 ZNF3P17036 446 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 GLRA1P23415 457 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 LRRC75BQ2VPJ9 315 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 LDLRAD2Q5SZI1 272 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 NCR3LG1Q68D85 454 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 LHFPL4Q7Z7J7 247 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 OR51G2Q8NGK0 314 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 OTULINQ96BN8 352 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 DGCR6LQ9BY27 220 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 OR51I2Q9H344 312 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
CLSTN3-213ENST00000541953 RIIAD1A6NNX1 92 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 H0YAE9 185 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 PIN1P1O15428 100 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 CD28P10747 220 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 CCL3L1P16619 93 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 COX7A1P24310 79 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 POU1F1P28069 291 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 HCCSP53701 268 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 MICAQ29983 383 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 NSUN5P1Q3KNT7 163 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 PLA1AQ53H76 456 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 CCBE1Q6UXH8 406 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 CD177Q8N6Q3 437 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 MED30Q96HR3 178 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 MEGF9Q9H1U4 602 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 MMP28Q9H239 520 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 OR51V1Q9H2C8 321 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 BAIAP2Q9UQB8 552 aa12.53□□□□□ -0.4
CLSTN3-213ENST00000541953 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 ZNF732B4DXR9 585 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 PSMD9O00233 223 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 SNX3O60493 162 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 IFNGP01579 166 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 LYNP07948 512 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 JUNBP17275 347 aaPredicted RBP12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 RAB13P51153 203 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 ZNF273Q14593 569 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 Q6ZS46 218 aa12.52□□□□□ -0.41
CLSTN3-213ENST00000541953 TMEM179BQ7Z7N9 219 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms