RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MAP3K7CLP57077 242 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 VSX2P58304 361 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 KDSRQ06136 332 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 ZNF763Q0D2J5 394 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CASP8Q14790 479 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SPECC1LQ69YQ0 1117 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 PDPK2PQ6A1A2 396 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 MRPL55Q7Z7F7 128 aaKnown RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 AKAP14Q86UN6 197 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 COMTD1Q86VU5 262 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SNX31Q8N9S9 440 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 DEFB124Q8NES8 71 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR2L5Q8NG80 312 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR7G1Q8NGA0 311 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR4F15Q8NGB8 312 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR51L1Q8NGJ5 315 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR10G9Q8NGN4 311 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR2G3Q8NGZ4 309 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 LILRB4Q8NHJ6 448 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CD300LFQ8TDQ1 290 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 DDI1Q8WTU0 396 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CCDC12Q8WUD4 166 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 APH1BQ8WW43 257 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 MYDGFQ969H8 173 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 FAM3DQ96BQ1 224 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 C16orf74Q96GX8 76 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 ANKRD36BP1Q96IX9 119 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 C9orf16Q9BUW7 83 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 GABARAPL3Q9BY60 117 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SHCBP1LQ9BZQ2 653 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 NDEL1Q9GZM8 345 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR51J1Q9H342 316 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 LRRC19Q9H756 370 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 C6orf50Q9HD87 102 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 C12orf4Q9NQ89 552 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CTPS2Q9NRF8 586 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 EURLQ9NYK6 297 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 TAS2R7Q9NYW3 318 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 IL37Q9NZH6 218 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 XCL2Q9UBD3 114 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 PCYOX1Q9UHG3 505 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 GGA2Q9UJY4 613 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 PRG3Q9Y2Y8 225 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 DENND4CQ5VZ89 1909 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 RAI1Q7Z5J4 1906 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 WDFY3Q8IZQ1 3526 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SPTA1P02549 2419 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 TENM4Q6N022 2769 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 NUP210Q8TEM1 1887 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 PLXND1Q9Y4D7 1925 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CITO14578 2027 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 LOC400499M0QZD8 3231 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 A0A0G2JLM5 398 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 RAB19A4D1S5 217 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ZFP92A6NM28 416 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ZNF726A6NNF4 738 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 NUPL2O15504 423 aaKnown RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 RAD51CO43502 376 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 FAM189A1O60320 539 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 SLC19A2O60779 497 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 RDH16O75452 317 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 SUPT7LO94864 414 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 KLHL2O95198 593 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CD160O95971 181 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CT45A6P0DMU7 189 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CT45A5P0DMU8 189 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CT45A7P0DMV0 189 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ATF6P18850 670 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 GGT1P19440 569 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 BTCP35070 178 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 GDI2P50395 445 aaKnown RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CCNG1P51959 295 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 UCNP55089 124 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 UBE2IP63279 158 aaKnown RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 TNNC1P63316 161 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 IGLV3-21P80748 117 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 SLC25A11Q02978 314 aaKnown RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CDH17Q12864 832 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 COTL1Q14019 142 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 PON2Q15165 354 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 OR7A5Q15622 319 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CT45A1Q5HYN5 189 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 FAM78AQ5JUQ0 283 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 SLC25A30Q5SVS4 291 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 THEM4Q5T1C6 240 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 UTF1Q5T230 341 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 C6orf183Q5T699 404 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 UBE2UQ5VVX9 321 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ANKRD22Q5VYY1 191 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 SLC25A25Q6KCM7 469 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 C12orf54Q6X4T0 127 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 VKORC1L1Q8N0U8 176 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CBR4Q8N4T8 237 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CSGALNACT2Q8N6G5 542 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 OR4A15Q8NGL6 344 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CT45A3Q8NHU0 189 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ANGPTL6Q8NI99 470 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 NEIL3Q8TAT5 605 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ITFG1Q8TB96 612 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 OR51E1Q8TCB6 317 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms