RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PRODH2Q9UF12 536 aa4.6□□□□□ -1.67
DDB1-219ENST00000541513 SMPXQ9UHP9 88 aa4.6□□□□□ -1.67
DDB1-219ENST00000541513 USH1CQ9Y6N9 552 aa4.6□□□□□ -1.67
DDB1-219ENST00000541513 TNRC6BQ9UPQ9 1833 aaKnown RBP4.6□□□□□ -1.67
DDB1-219ENST00000541513 TP53BP1Q12888 1972 aaPredicted RBP4.6□□□□□ -1.67
DDB1-219ENST00000541513 GPR179Q6PRD1 2367 aa4.6□□□□□ -1.67
DDB1-219ENST00000541513 EP300Q09472 2414 aaPredicted RBP4.6□□□□□ -1.67
DDB1-219ENST00000541513 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 A0A0B4J2E0 115 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 A0A1B0GX12 115 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 HACD1B0YJ81 288 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SEC14L6B5MCN3 397 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 ZNF587BE7ETH6 402 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 DFFAO00273 331 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 CCL21O00585 134 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 MGST3O14880 152 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 INPP4BO15327 924 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 FGF16O43320 207 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 ERI3O43414 337 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 FADS1O60427 444 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 CTSVO60911 334 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 CEACAM4O75871 244 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SRP72O76094 671 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 FRYLO94915 3013 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 UTS2O95399 124 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 HLA-AP01891 365 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 RBP1P09455 135 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 FBP1P09467 338 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 C8orf88P0DMB2 117 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 CDH1P12830 882 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 TDGF1P13385 188 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 RPL35AP18077 110 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 RAB3AP20336 220 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SHMT2P34897 504 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 HSPA9P38646 679 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 PTGDSP41222 190 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 ELK3P41970 407 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 TSFMP43897 325 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 TMEM33P57088 247 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SNRPD1P62314 119 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 ELF3P78545 371 aaPredicted RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 SSBP2P81877 361 aaPredicted RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 LTBQ06643 244 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SLC10A2Q12908 348 aaPredicted RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 GAGE5Q13069 117 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 GAGE6Q13070 117 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 UNC119Q13432 240 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 TMEM187Q14656 261 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 IRF4Q15306 451 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SLC1A5Q15758 541 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 C9orf64Q5T6V5 341 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 C22orf39Q6P5X5 142 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 TMEM207Q6UWW9 146 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 AMIGO2Q86SJ2 522 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 PUSL1Q8N0Z8 303 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 OR5L1Q8NGL2 311 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SYNPRQ8TBG9 265 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SLC7A13Q8TCU3 470 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 ZNRF4Q8WWF5 429 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 PIEZO1Q92508 2521 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 TCEAL3Q969E4 200 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 MRPL48Q96GC5 212 aaKnown RBP4.59□□□□□ -1.67
DDB1-219ENST00000541513 EPYCQ99645 322 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 TMEM59Q9BXS4 323 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 RBKSQ9H477 322 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 GAREM1Q9H706 876 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 FKRPQ9H9S5 495 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 EHFQ9NZC4 300 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 IL17CQ9P0M4 197 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 MGAT4AQ9UM21 535 aa4.59□□□□□ -1.67
DDB1-219ENST00000541513 SCN8AQ9UQD0 1980 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 PLXNA2O75051 1894 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 LAMA1P25391 3075 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 ZNF292O60281 2723 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 FTCDNL1E5RQL4 147 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 H0Y980 276 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 H3BNH8 94 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 KPNA3O00505 521 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 MAGEB4O15481 346 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 RGS14O43566 566 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 HPGDSO60760 199 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 MPZL1O95297 269 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 SERPINA1P01009 418 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 CATP04040 527 aaKnown RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 TCRBP04435 133 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 HLA-EP13747 358 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 ZNF12P17014 697 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 JUNBP17275 347 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 IGFBP3P17936 291 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 RCVRNP35243 200 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 GPX4P36969 197 aaPredicted RBP4.58□□□□□ -1.68
DDB1-219ENST00000541513 CXCL12P48061 93 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 GABRA4P48169 554 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 CYB561P49447 251 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 GNG11P61952 73 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 DYNLT1P63172 113 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 DEFA6Q01524 100 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 ASAH1Q13510 395 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 ZNF235Q14590 738 aa4.58□□□□□ -1.68
DDB1-219ENST00000541513 SIX1Q15475 284 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms