RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 NLKQ9UBE8 527 aa21.77■■□□□ 1.08
CHFR-218ENST00000540963 OR2AT4A6NND4 320 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 ANGPTL7O43827 346 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 FABP3P05413 133 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 PAPD5Q8NDF8 572 aaKnown RBP21.76■■□□□ 1.07
CHFR-218ENST00000540963 OR5P3Q8WZ94 311 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 MCUR1Q96AQ8 359 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 PHF21AQ96BD5 680 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 NMNAT2Q9BZQ4 307 aa21.76■■□□□ 1.07
CHFR-218ENST00000540963 TCRBV5S2A0A599 114 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 CST4P01036 141 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 PAICSP22234 425 aaKnown RBP21.75■■□□□ 1.07
CHFR-218ENST00000540963 NSUN5P1Q3KNT7 163 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 ZNF770Q6IQ21 691 aaPredicted RBP21.75■■□□□ 1.07
CHFR-218ENST00000540963 FAM57BQ71RH2 274 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 OR5K1Q8NHB7 308 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 RNF133Q8WVZ7 376 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 RPL3LQ92901 407 aaKnown RBP21.75■■□□□ 1.07
CHFR-218ENST00000540963 BTBD10Q9BSF8 475 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 MMP28Q9H239 520 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 HEXA-AS1Q9H8Q6 139 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 SERTAD4Q9NUC0 356 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 LRP12Q9Y561 859 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 LYVE1Q9Y5Y7 322 aa21.75■■□□□ 1.07
CHFR-218ENST00000540963 MEGF11A6BM72 1044 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 AKR7A2O43488 359 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 CHST1O43916 411 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 DCTDP32321 178 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 ZNF121P58317 390 aaPredicted RBP21.74■■□□□ 1.07
CHFR-218ENST00000540963 GMFBP60983 142 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 CYP2R1Q6VVX0 501 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 LINC00471Q8N535 108 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 PIFOQ8TCI5 191 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 R3HDM4Q96D70 268 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 VNN3Q9NY84 501 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 BAIAP2Q9UQB8 552 aa21.74■■□□□ 1.07
CHFR-218ENST00000540963 A0A1W2PPH5 198 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 VGLL3A8MV65 326 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 GLCEO94923 617 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 SPI1P17947 270 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 MAGEA2P43356 314 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 MS4A2Q01362 244 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 PPP1R8Q12972 351 aaKnown RBP21.73■■□□□ 1.07
CHFR-218ENST00000540963 PRDX4Q13162 271 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 EIF2B1Q14232 305 aaKnown RBP21.73■■□□□ 1.07
CHFR-218ENST00000540963 OR9Q2Q8NGE9 314 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 OR8D4Q8NGM9 314 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 WIPF2Q8TF74 440 aaPredicted RBP21.73■■□□□ 1.07
CHFR-218ENST00000540963 ZNF702PQ9H963 129 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 ZNF319Q9P2F9 582 aa21.73■■□□□ 1.07
CHFR-218ENST00000540963 KRT36O76013 467 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 T-ENOLP0DO92 83 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 FAHP16930 419 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 GLRA1P23415 457 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 GABRA2P47869 451 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 CRMP1Q14194 572 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 C16orf89Q6UX73 402 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 RASSF6Q6ZTQ3 369 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 SDSLQ96GA7 329 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 RNF170Q96K19 258 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 ABHD6Q9BV23 337 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 ZNF222Q9UK12 451 aa21.72■■□□□ 1.07
CHFR-218ENST00000540963 IGKV1D-17A0A075B6S4 117 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 ZNF850A8MQ14 1090 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 DCTN3O75935 186 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 GASTP01350 101 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 GYPBP06028 91 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 CD28P10747 220 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 SPATS1Q496A3 300 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 FOXB2Q5VYV0 432 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 KCTD8Q6ZWB6 473 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 FAM185AQ8N0U4 392 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 LYG1Q8N1E2 194 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 ZNRF1Q8ND25 227 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 OR6K6Q8NGW6 343 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 PGAM5Q96HS1 289 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 ACTR3BQ9P1U1 418 aa21.71■■□□□ 1.07
CHFR-218ENST00000540963 COL7A1Q02388 2944 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 hCG_1809904A0A1W2PP81 198 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 A0A1W2PPE2 198 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 A0A1W2PR64 198 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 A0A1W2PRV1 198 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 ADARB2-AS1A8MUL3 147 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 TFF1P04155 84 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 PSG2P11465 335 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 OPRL1P41146 370 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 BMXP51813 675 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 LGALS4P56470 323 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 GFOD2Q3B7J2 385 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 LINC01590Q5TEZ4 76 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 KRT74Q7RTS7 529 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 TIGD4Q8IY51 512 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 MKXQ8IYA7 352 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 WFDC9Q8NEX5 89 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 TMEM185AQ8NFB2 350 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 HPSE2Q8WWQ2 592 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 ITFG2Q969R8 447 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 INTS14Q96SY0 518 aa21.7■■□□□ 1.06
CHFR-218ENST00000540963 ELL3Q9HB65 397 aaPredicted RBP21.7■■□□□ 1.06
CHFR-218ENST00000540963 DNAJC27Q9NZQ0 273 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms