RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 GALP22466 123 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 CFHR2P36980 270 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 PPP3R1P63098 170 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 KCNJ8Q15842 424 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 MOB3CQ70IA8 216 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 ZNF671Q8TAW3 534 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 ITLN1Q8WWA0 313 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 TMEM106AQ96A25 262 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 FGGYQ96C11 551 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 PGLYRP3Q96LB9 341 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 OR5M11Q96RB7 305 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 ZCCHC4Q9H5U6 513 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 GCM1Q9NP62 436 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 POLDIP2Q9Y2S7 368 aa14.84□□□□□ -0.03
CLSTN3-210ENST00000540931 USF3Q68DE3 2245 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 TRBV5-5A0A0J9YX44 114 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 LILRA1O75019 489 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 LALBAP00709 142 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 RAB3AP20336 220 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 ANOS1P23352 680 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 GABRA5P31644 462 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 RBP2P50120 134 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 ATP1B3P54709 279 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 MAB21L1Q13394 359 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 XAF1Q6GPH4 301 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 LHFPL2Q6ZUX7 228 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 KCTD8Q6ZWB6 473 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 OR1M1Q8NGA1 313 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 OR10Z1Q8NGY1 313 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 SGCDQ92629 289 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 BORCS8Q96FH0 119 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 TLNRD1Q9H1K6 362 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 ABCA2Q9BZC7 2435 aa14.83□□□□□ -0.04
CLSTN3-210ENST00000540931 MEGF11A6BM72 1044 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 ZNF879B4DU55 563 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 H0YL77 283 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 CCRL2O00421 344 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 GPX5O75715 221 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 ARL6IP5O75915 188 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 NCR1O76036 304 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 CYB5AP00167 134 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 ATF1P18846 271 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 PCMT1P22061 227 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 ARMCX4Q5H9R4 360 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 DNM1P46Q6ZS02 220 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 CDH26Q8IXH8 852 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 MUC20Q8N307 709 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 C10orf105Q8TEF2 133 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 CCL17Q92583 94 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 SOX7Q9BT81 388 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 SLITRK2Q9H156 845 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 RHOFQ9HBH0 211 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 TMEM106BQ9NUM4 274 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 RNF7Q9UBF6 113 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 FOXJ3Q9UPW0 622 aa14.82□□□□□ -0.04
CLSTN3-210ENST00000540931 ACANP16112 2415 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 MAGEA13PA6NCF6 341 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 TRIM64BA6NI03 449 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 A6NLC8 198 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 ZNF732B4DXR9 585 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 SULT1B1O43704 296 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 ALDOBP05062 364 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 ACAA1P09110 424 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 HOXB4P17483 251 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 MAP2K4P45985 399 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 GPR6P46095 362 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 PRSS12P56730 875 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 DOC2BQ14184 412 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 LIPKQ5VXJ0 399 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 PHC2Q8IXK0 858 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 GTF3AQ92664 365 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 ADAT3Q96EY9 351 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 PKIBQ9C010 78 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 NPTNQ9Y639 398 aa14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 SIRT4Q9Y6E7 314 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-210ENST00000540931 NDUFA2O43678 99 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 NDUFS7O75251 213 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 RP2O75695 350 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 GRPP07492 148 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 FSTP19883 344 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 PSMB9P28065 219 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 GPM6AP51674 278 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 ZNF154Q13106 437 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 RIN1Q13671 783 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 CARTPTQ16568 116 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 TIMM50Q3ZCQ8 353 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 CEP78Q5JTW2 689 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 SYT6Q5T7P8 510 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 MKXQ8IYA7 352 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 Q8IYB0 196 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 ZNF525Q8N782 197 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 ZFP41Q8N8Y5 198 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 OR51A4Q8NGJ6 313 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 OPALINQ96PE5 141 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 TMUB1Q9BVT8 246 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 TMEM138Q9NPI0 162 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 PCDHB16Q9NRJ7 776 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 GPR173Q9NS66 373 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 NDUFB11Q9NX14 153 aa14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 RASL12Q9NYN1 266 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms