RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 WHAMMP3Q1A5X7 153 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 RSPO1Q2MKA7 263 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 TMEM95Q3KNT9 176 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 LRIF1Q5T3J3 769 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 STUMQ69YW2 141 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 KCTD18Q6PI47 426 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SLC2A7Q6PXP3 512 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 TMEM219Q86XT9 240 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 RBM45Q8IUH3 476 aaKnown RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SBSPONQ8IVN8 264 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 IFT20Q8IY31 132 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 LRRC75AQ8NAA5 344 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 GJC3Q8NFK1 279 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 GPR32P1Q8NGA4 272 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 OR4D11Q8NGI4 311 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 OR52H1Q8NGJ2 320 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 TMEM239Q8WW34 195 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 MED30Q96HR3 178 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 PRR25Q96S07 402 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SORT1Q99523 831 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 POLR2J2Q9GZM3 115 aaKnown RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 C20orf27Q9GZN8 174 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 POLR2J3Q9H1A7 115 aaKnown RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 MYLK2Q9H1R3 596 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SDR39U1Q9NRG7 319 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SLC25A10Q9UBX3 287 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-214ENST00000540865 PYCARDQ9ULZ3 195 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
SNHG1-214ENST00000540865 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.82
SNHG1-214ENST00000540865 hCG_1809904A0A1W2PP81 198 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 A0A1W2PPE2 198 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 A0A1W2PPH5 198 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 A0A1W2PR64 198 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 A0A1W2PRV1 198 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 PRSS37A4D1T9 235 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 H7C1C5 153 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 M0QX08 132 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MGST3O14880 152 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 SIGLEC5O15389 551 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 BIRC5O15392 142 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 KHDRBS3O75525 346 aaKnown RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 TIPRLO75663 272 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 RHBDL1O75783 438 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 OR5F1O95221 314 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 LCATP04180 440 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 ACSM4P0C7M7 580 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 SELLP14151 372 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 CTLA4P16410 223 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 GPX2P18283 190 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 SLC1A6P48664 564 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 VEGFCP49767 419 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 RAB13P51153 203 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 POLR2JP52435 117 aaKnown RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 LCN6P62502 163 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 RAB32Q13637 225 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 DGUOKQ16854 277 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 ANKDD1AQ495B1 522 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 PLA1AQ53H76 456 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 C9orf66Q5T8R8 295 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF788Q6ZQV5 615 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 C16orf82Q7Z2V1 217 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MRPL21Q7Z2W9 205 aaKnown RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 DPY19L4Q7Z388 723 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 KCTD20Q7Z5Y7 419 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 NKAIN4Q8IVV8 208 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MSRB3Q8IXL7 192 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 C11orf53Q8IXP5 236 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MKXQ8IYA7 352 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 DYNAPQ8N1N2 210 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MNS1Q8NEH6 495 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 OR5K1Q8NHB7 308 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 TMEM255BQ8WV15 326 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 ISOC1Q96CN7 298 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 RBMXL1Q96E39 390 aaKnown RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MALSU1Q96EH3 234 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 GAFA1Q96PS6 74 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 RAB3IPQ96QF0 476 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 P2RX4Q99571 388 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF649Q9BS31 505 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 EDA2RQ9HAV5 297 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 KCNK9Q9NPC2 374 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 HAO2Q9NYQ3 351 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 SLC25A37Q9NYZ2 338 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 GRHPRQ9UBQ7 328 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 POLR1DQ9Y2S0 133 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 MED31Q9Y3C7 131 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 TBL2Q9Y4P3 447 aaKnown RBP3.65□□□□□ -1.83
SNHG1-214ENST00000540865 LRP12Q9Y561 859 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 SMAD5-AS1Q9Y6J3 95 aa3.65□□□□□ -1.83
SNHG1-214ENST00000540865 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
SNHG1-214ENST00000540865 DNAH17Q9UFH2 4485 aa3.64□□□□□ -1.83
SNHG1-214ENST00000540865 TRBV5-3A0A0A0MS03 114 aa3.64□□□□□ -1.83
SNHG1-214ENST00000540865 GGT3PA6NGU5 568 aa3.64□□□□□ -1.83
SNHG1-214ENST00000540865 TRPC5OSA6NMA1 111 aa3.64□□□□□ -1.83
SNHG1-214ENST00000540865 FAM90A22PA8MWA6 464 aa3.64□□□□□ -1.83
SNHG1-214ENST00000540865 EVPLLA8MZ36 301 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms