RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ZNF181Q2M3W8 571 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 FAM76BQ5HYJ3 339 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 DMRTC1Q5HYR2 192 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 C11orf53Q8IXP5 236 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 C1orf87Q8N0U7 546 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
DDB1-218ENST00000540784 Q8TCH9 128 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 TSEN15Q8WW01 171 aaKnown RBP13.07□□□□□ -0.32
DDB1-218ENST00000540784 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 ADAT3Q96EY9 351 aaPredicted RBP13.07□□□□□ -0.32
DDB1-218ENST00000540784 TECTBQ96PL2 329 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 RNF7Q9UBF6 113 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 NPTNQ9Y639 398 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 OTOGQ6ZRI0 2925 aa13.07□□□□□ -0.32
DDB1-218ENST00000540784 SMAD7O15105 426 aaKnown RBP13.06□□□□□ -0.32
DDB1-218ENST00000540784 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
DDB1-218ENST00000540784 HSMCR30P0CW71 290 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 SOX2P48431 317 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 FUT6P51993 359 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 ZNF154Q13106 437 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 UBE2V2Q15819 145 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 YIF1BQ5BJH7 314 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 ZNF826PQ6ZT77 177 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 WDR86Q86TI4 376 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 SVOPQ8N4V2 548 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 OR5D14Q8NGL3 314 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
DDB1-218ENST00000540784 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 CHST5Q9GZS9 411 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 FGF23Q9GZV9 251 aaPredicted RBP13.06□□□□□ -0.32
DDB1-218ENST00000540784 OR51I2Q9H344 312 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 DCAF16Q9NXF7 216 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 WIPI2Q9Y4P8 454 aa13.06□□□□□ -0.32
DDB1-218ENST00000540784 FAM230AA0A1W2PPH8 454 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 hCG_1807616A0A1W2PRN6 198 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 LRP5LA4QPB2 252 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 CDIPTO14735 213 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 CD2P06729 351 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 OCM2P0CE71 109 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 ATF1P18846 271 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 RBMXP38159 391 aaKnown RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 CHN2P52757 468 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 EMX1Q04741 257 aaPredicted RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 LOXL1Q08397 574 aaPredicted RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 HNRNPA0Q13151 305 aaKnown RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 GPR50Q13585 617 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 DOC2BQ14184 412 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 CNN3Q15417 329 aaKnown RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 UTS2BQ765I0 119 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 ZNF573Q86YE8 665 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 MS4A15Q8N5U1 240 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 BOLLQ8N9W6 283 aaKnown RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 SCCPDHQ8NBX0 429 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 ZNF671Q8TAW3 534 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 RGP1Q92546 391 aaPredicted RBP13.05□□□□□ -0.32
DDB1-218ENST00000540784 C18orf12Q96KH6 178 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 TLNRD1Q9H1K6 362 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 ZCCHC4Q9H5U6 513 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 NEK6Q9HC98 313 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
DDB1-218ENST00000540784 MAST4O15021 2626 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PPIAL4EA0A075B759 164 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 IGHV4-61A0A0C4DH41 118 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PQLC2LA1A4F0 135 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 ISPDA4D126 451 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PPIAL4DF5H284 164 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PPIAL4FP0DN26 164 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 FOSL1P15407 271 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PRKACBP22694 351 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 TPBGQ13641 420 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 TBCEQ15813 527 aaPredicted RBP13.04□□□□□ -0.32
DDB1-218ENST00000540784 KCTD21Q4G0X4 260 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 LRRC28Q86X40 367 aaPredicted RBP13.04□□□□□ -0.32
DDB1-218ENST00000540784 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 TRMT10AQ8TBZ6 339 aaKnown RBP13.04□□□□□ -0.32
DDB1-218ENST00000540784 NPRL2Q8WTW4 380 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 UFD1Q92890 307 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PGLYRP3Q96LB9 341 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 MGLLQ99685 303 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 LRCH1Q9Y2L9 728 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 PPIAL4AQ9Y536 164 aa13.04□□□□□ -0.32
DDB1-218ENST00000540784 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 TRBV5-5A0A0J9YX44 114 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 WNT9BO14905 357 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 ALX3O95076 343 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 ZNF205O95201 554 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 LHBP01229 141 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 CFHR2P36980 270 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 HAAOP46952 286 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 RBP2P50120 134 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 ATP1B3P54709 279 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 RPS11P62280 158 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDB1-218ENST00000540784 BTG1P62324 171 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 MLLT11Q13015 90 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms