RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 AK6Q9Y3D8 172 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-213ENST00000540022 DANCRP0C864 163 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 NAT2P11245 290 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 BDKRB2P30411 391 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 RPS19P39019 145 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 OR10A3P58181 314 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 CNN3Q15417 329 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 OR8G1Q15617 311 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 CEACAM21Q3KPI0 293 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 USP43Q70EL4 1123 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 NR2C2APQ86WQ0 139 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 ZNF611Q8N823 705 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 OR52N4Q8NGI2 321 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 SPACA5Q96QH8 159 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 HIST1H2AAQ96QV6 131 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 NKX3-1Q99801 234 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 FAM192AQ9GZU8 254 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 DCSTAMPQ9H295 470 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 TPK1Q9H3S4 243 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 UBTD1Q9HAC8 227 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 CGGBP1Q9UFW8 167 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 ANXA2P2A6NMY6 339 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 M0R233 179 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 SOD3P08294 240 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 OCMP0CE72 109 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 RAB3BP20337 219 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 THBS2P35442 1172 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 ZNF81P51508 661 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 CAV3P56539 151 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 CRIP3Q6Q6R5 217 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 TMEM200AQ86VY9 491 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 TPRA1Q86W33 373 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 SPSB1Q96BD6 273 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 TECTBQ96PL2 329 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 PLEKHF2Q9H8W4 249 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 CYSLTR2Q9NS75 346 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 SLC7A11Q9UPY5 501 aa16.09■□□□□ 0.17
TNFRSF1A-213ENST00000540022 IGKV1-27A0A075B6S5 117 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 FAM230AA0A1W2PPH8 454 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MEGF11A6BM72 1044 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 F5H5P2 479 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SPRY3O43610 288 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NCR1O76036 304 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 IL1AP01583 271 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CD8AP01732 235 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ALDOBP05062 364 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 HCKP08631 526 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PRKACBP22694 351 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 DDI2Q5TDH0 399 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 LYPD6Q86Y78 171 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ZCCHC24Q8N2G6 241 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR2Z1Q8NG97 314 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR5A2Q8NGI9 324 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR8S1Q8NH09 359 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NRGNQ92686 78 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 RNF170Q96K19 258 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ABCB9Q9NP78 766 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CBLN4Q9NTU7 201 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 FAIMQ9NVQ4 179 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CELSR1Q9NYQ6 3014 aa16.08■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ROS1P08922 2347 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PLCE1Q9P212 2302 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 A0A0G2JK05 382 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PQLC2LA1A4F0 135 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 TRIM64BA6NI03 449 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 PDCD5O14737 125 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 IGHV1-46P01743 117 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 GPM6AP51674 278 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 FUT6P51993 359 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 AGAP6Q5VW22 663 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 C11orf71Q6IPW1 123 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 WDR86Q86TI4 376 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 DTX2Q86UW9 622 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ELMOD3Q96FG2 381 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 BORCS8Q96FH0 119 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MICU1Q9BPX6 476 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 V9GY05 133 aa16.07■□□□□ 0.16
TNFRSF1A-213ENST00000540022 C17orf100A8MU93 164 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ZNF732B4DXR9 585 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MAGEB3O15480 346 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ERCC1P07992 297 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CD37P11049 281 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SNRPD2P62316 118 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 MAB21L1Q13394 359 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 KISS1Q15726 138 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SPRNQ5BIV9 151 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NKAIN3Q8N8D7 197 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 SPERTQ8NA61 448 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 RFT1Q96AA3 541 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 TRAF4Q9BUZ4 470 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 RTL8AQ9BWD3 113 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 CXXC4Q9H2H0 198 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 LIME1Q9H400 295 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 DYNLRB1Q9NP97 96 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 ZDHHC8Q9ULC8 765 aa16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 NOP16Q9Y3C1 178 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-213ENST00000540022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 IGHV3-64DA0A0J9YX35 117 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 LOC100289279A0A1B0GTE1 492 aa16.05■□□□□ 0.16
TNFRSF1A-213ENST00000540022 OR5B21A6NL26 309 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms