RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 FCGR2CP31995 323 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 GSK3AP49840 483 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 ZP4Q12836 540 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 ERGIC1Q969X5 290 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 HIST1H2BAQ96A08 127 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 RSRP1Q9BUV0 290 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 OR10A2Q9H208 303 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 CHRDQ9H2X0 955 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 CACFD1Q9UGQ2 172 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 ANAPC10Q9UM13 185 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 COLQQ9Y215 455 aaPredicted RBP17.85■□□□□ 0.45
TMEM260-203ENST00000539559 LIPT2A6NK58 231 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 A6NLC8 198 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF878C9JN71 531 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 RNF4P78317 190 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 HGFACQ04756 655 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF283Q8N7M2 679 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 OCSTAMPQ9BR26 566 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 NCOA6Q14686 2063 aaPredicted RBP17.85■□□□□ 0.45
TMEM260-203ENST00000539559 SULT1A2P50226 295 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 TMEM33P57088 247 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 RAB5BP61020 215 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 MYBPHQ13203 477 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 KRBOX4Q5JUW0 171 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 OR56B1Q8NGI3 324 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 SMCO4Q9NRQ5 59 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 FBLN5Q9UBX5 448 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 B3GALT5Q9Y2C3 310 aa17.85■□□□□ 0.45
TMEM260-203ENST00000539559 RPH3AQ9Y2J0 694 aaPredicted RBP17.85■□□□□ 0.45
TMEM260-203ENST00000539559 CEACAM18A8MTB9 384 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 K7EPK0 472 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 C1QL1O75973 258 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 SMCO1Q147U7 214 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 SP6Q3SY56 376 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 PPP1R3BQ86XI6 285 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 FAM71E2Q8N5Q1 922 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 MRPL24Q96A35 216 aaKnown RBP17.84■□□□□ 0.45
TMEM260-203ENST00000539559 CABIN1Q9Y6J0 2220 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 STMND1H3BQB6 276 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 IFNA4P05014 189 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 PTAFRP25105 342 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 HSD11B2P80365 405 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 CHRFAM7AQ494W8 412 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 TMEM268Q5VZI3 342 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 C6orf201Q7Z4U5 140 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 SPEM1Q8N4L4 309 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 MRPL13Q9BYD1 178 aaKnown RBP17.84■□□□□ 0.45
TMEM260-203ENST00000539559 CNTNAP3Q9BZ76 1288 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 ZNF581Q9P0T4 197 aa17.84■□□□□ 0.45
TMEM260-203ENST00000539559 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 hCG_1809904A0A1W2PP81 198 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 A0A1W2PPH5 198 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 A0A1W2PR64 198 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 A0A1W2PRV1 198 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 ANKUB1A6NFN9 424 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 PRSS12P56730 875 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 GABREP78334 506 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 CFHR1Q03591 330 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 SKA3Q8IX90 412 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 CDX2Q99626 313 aaPredicted RBP17.83■□□□□ 0.44
TMEM260-203ENST00000539559 DHRS7CA6NNS2 312 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 ZNF616Q08AN1 781 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 EIF2S3LQ2VIR3 472 aaKnown RBP17.83■□□□□ 0.44
TMEM260-203ENST00000539559 ACTBL2Q562R1 376 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 CRIP3Q6Q6R5 217 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 DDIT4LQ96D03 193 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 URM1Q9BTM9 101 aaKnown RBP17.83■□□□□ 0.44
TMEM260-203ENST00000539559 DNAJB11Q9UBS4 358 aa17.83■□□□□ 0.44
TMEM260-203ENST00000539559 MCTS1Q9ULC4 181 aaKnown RBP17.83■□□□□ 0.44
TMEM260-203ENST00000539559 LILRA5A6NI73 299 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 VSTM2BA6NLU5 285 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 RHPN2P1A8MT19 583 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 C1orf196B1AJZ1 125 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 S100A6P06703 90 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 PET100P0DJ07 73 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 GABRR1P24046 479 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 RBMXP38159 391 aaKnown RBP17.82■□□□□ 0.44
TMEM260-203ENST00000539559 ECH1Q13011 328 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 KISS1Q15726 138 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 MIDNQ504T8 468 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 AWAT1Q58HT5 328 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 PIGTQ969N2 578 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 NUDT16L1Q9BRJ7 211 aaKnown RBP17.82■□□□□ 0.44
TMEM260-203ENST00000539559 ZNF2Q9BSG1 426 aaPredicted RBP17.82■□□□□ 0.44
TMEM260-203ENST00000539559 PECRQ9BY49 303 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 UCK1Q9HA47 277 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 M0R036 132 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 IFNA2P01563 188 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 ARG1P05089 322 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 SFTPDP35247 375 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 DVL1P1P54792 670 aaPredicted RBP17.82■□□□□ 0.44
TMEM260-203ENST00000539559 ABCA7Q8IZY2 2146 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 SEMA6DQ8NFY4 1073 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 ZDHHC12Q96GR4 267 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 NIT2Q9NQR4 276 aa17.82■□□□□ 0.44
TMEM260-203ENST00000539559 ADAMTS9Q9P2N4 1935 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 XRCC2O43543 280 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 CST4P01036 141 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 FOSL2P15408 326 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 UEVLDQ8IX04 471 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms